TCONS_00055794-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055794-protein
Unique NameTCONS_00055794-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length159

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055794-protein ID=TCONS_00055794-protein|Name=TCONS_00055794-protein|organism=Clytia hemisphaerica|type=polypeptide|length=159bp
MLKYLILFALLLWFCEAGDVRCKCICPKETHSNKSNIIVVNNLTSPDECH
CSNIVGREETFCLRCECKFETRNTVLIKAIIIIVLLSIATLYVYMFICMI
QKRCKKPELSVTSDAIQEQLKEPVVRKRFNSTIGQIERRMTLWQSQVDEQ
RNNVFGSTS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035122XLOC_035122Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055794TCONS_00055794Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008853TMEM9
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008853TMEM9PFAMPF05434Tmemb_9coord: 48..156
e-value: 9.7E-17
score: 61.1

Blast
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BLAST of TCONS_00055794-protein vs. Swiss-Prot (Human)
Match: TMEM9 (Transmembrane protein 9 OS=Homo sapiens GN=TMEM9 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.292e-18
Identity = 54/160 (33.75%), Postives = 79/160 (49.38%), Query Frame = 0 
Query:   19 DVRCKCICPKETHSNKSNIIVVNNLTSPDECHCSNIV------GRE-ETFCLRCECKFETRNTVLIKAIIIIVLLSIATLYVYM-FICMIQKRCKKPELSVTSDAIQEQLKE---------------PVVRKRFNSTIGQIERRMTLWQSQVDEQRNNVF 155
            D+RCKCICP   + N S  I   N++  D C+C ++V      G + E +CL CEC++E R+T  IK II+I L  +  L +YM F+ ++    +KP      DA  EQL                  +   R N+ + ++E     W+ QV EQR  VF
Sbjct:   26 DIRCKCICP--PYRNISGHIYNQNVSQKD-CNCLHVVEPMPVPGHDVEAYCLLCECRYEERSTTTIKVIIVIYLSVVGALLLYMAFLMLVDPLIRKP------DAYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQEQRKTVF 176
The following BLAST results are available for this feature:
BLAST of TCONS_00055794-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TMEM92.292e-1833.75Transmembrane protein 9 OS=Homo sapiens GN=TMEM9 P... [more]
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