TCONS_00055894-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055894-protein
Unique NameTCONS_00055894-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length209

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055894-protein ID=TCONS_00055894-protein|Name=TCONS_00055894-protein|organism=Clytia hemisphaerica|type=polypeptide|length=209bp
MSFDFNGRVALITGASSGIGKGAAIYLAKNGAKLAITGRNEENLKLVATQ
CEDVCPNKEKVLTIVGDLSKEEDTARTIEETIKHFNQLDILVNSAGIVVN
GTAESTSLQDYDMQMNINLRSVFHITKLAIPHLIKTKGNIVNVSSVTGLR
SFPGVSTYCMSKAALDQYTRTTALELASQQVRCNAVNPGVIRTEIHKRGG
MSEEDYAKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035196XLOC_035196Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055894TCONS_00055894Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR020904Sc_DH/Rdtase_CS
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00080SDRFAMILYcoord: 138..146
score: 58.7
coord: 86..97
score: 51.19
coord: 158..177
score: 37.3
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 179..196
score: 36.01
coord: 9..26
score: 48.48
coord: 86..97
score: 50.8
coord: 132..148
score: 36.91
coord: 158..177
score: 39.39
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 9..197
e-value: 1.5E-54
score: 184.3
NoneNo IPR availableGENE3D3.40.50.720coord: 1..209
e-value: 7.0E-63
score: 211.4
IPR020904Short-chain dehydrogenase/reductase, conserved sitePROSITEPS00061ADH_SHORTcoord: 145..173
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 6..201

Blast
[Close]
BLAST of TCONS_00055894-protein vs. Swiss-Prot (Human)
Match: CBR4 (Carbonyl reductase family member 4 OS=Homo sapiens GN=CBR4 PE=1 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 2.671e-28
Identity = 70/202 (34.65%), Postives = 106/202 (52.48%), Query Frame = 0 
Query:    8 RVALITGASSGIGKGAAIYLAKNGAKLAITGRNEENLKLVATQCEDVCPNKEKVLTIVGDLSKEEDTARTIEETIKHFNQLDILVNSAGIVVNGTAESTSLQDYDMQMNINLRSVFHITKLAIPHLIKTKG-NIVNVSSVTGLRSFPGVSTYCMSKAALDQYTRTTALELASQQVRCNAVNPGVIRTEIHKRGGMSEEDYAK 208
            +V  + G S GIG+  A  +A+ G +LA+  RN E  K  A    D+  +    L    D++KE D   T EE  KH  +++ LVN+AGI  +G    T  +D   Q++ NL       K A+  +I+ +G +IVNV S+ GL+   G S Y  SK  L  ++R  A E+A +++R N V PG + T++ K   + EE   K
Sbjct:    3 KVCAVFGGSRGIGRAVAQLMARKGYRLAVIARNLEGAKAAAG---DLGGDH---LAFSCDVAKEHDVQNTFEELEKHLGRVNFLVNAAGINRDGLLVRTKTEDMVSQLHTNLLGSMLTCKAAMRTMIQQQGGSIVNVGSIVGLKGNSGQSVYSASKGGLVGFSRALAKEVARKKIRVNVVAPGFVHTDMTKD--LKEEHLKK 196
The following BLAST results are available for this feature:
BLAST of TCONS_00055894-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CBR42.671e-2834.65Carbonyl reductase family member 4 OS=Homo sapiens... [more]
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