TCONS_00055903-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055903-protein
Unique NameTCONS_00055903-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length258

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055903-protein ID=TCONS_00055903-protein|Name=TCONS_00055903-protein|organism=Clytia hemisphaerica|type=polypeptide|length=258bp
MTVFMLVVADIIPATSDVIPLVGIFFSASMIEMVIMIVVLCYIMRLYHKG
PNDPPMPLWMKKYIYDWLSYKMRVRKQSRKQSLQRGSSRKDSYNYHKLNA
QNDEEDIEHVKWNKRSLNNIIFNKLNNYQHNNQNNQHQEERLSPLLFYNH
FSNFQPSTLDRRQTALNPMKVRRTGRHNHQPPPFGVTNLVTRPTESQIML
SKMEALLKHIRQVEYQNNIRNQWRTVAKTLDYCLFIFFFITYLTTFITCS
LKSPGYVW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035198XLOC_035198Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055903TCONS_00055903Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006029Neurotrans-gated_channel_TM
Vocabulary: Biological Process
TermDefinition
GO:0006811ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006029Neurotransmitter-gated ion-channel transmembrane domainPFAMPF02932Neur_chan_membcoord: 1..245
e-value: 4.0E-21
score: 76.1
IPR006029Neurotransmitter-gated ion-channel transmembrane domainSUPERFAMILY90112Neurotransmitter-gated ion-channel transmembrane porecoord: 183..251
coord: 1..135
NoneNo IPR availableGENE3D1.20.58.390coord: 1..255
e-value: 3.3E-19
score: 68.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..97

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055903-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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