Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00055927-protein ID=TCONS_00055927-protein|Name=TCONS_00055927-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1082bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00055927-protein vs. Swiss-Prot (Human)
Match: LTBP4 (Latent-transforming growth factor beta-binding protein 4 OS=Homo sapiens GN=LTBP4 PE=1 SV=2) HSP 1 Score: 296.59 bits (758), Expect = 5.524e-83 Identity = 221/582 (37.97%), Postives = 309/582 (53.09%), Query Frame = 0 Query: 27 GTHVCKETGNTTVCCKGWK--QQGNACPLDIDEC--TAKPCQQN-CKNTAGSFQCSCNVGYKVDPKDSSKCLDIDECTTSPCQQD---CKNTAGSFQCSCGVGYKVDPKDLKKCLDIDECTTKP---CQQNCKNTPGSFQCSCGVGYKVDPKDLTKCLDIDECTTNP---CQQDCKNTAGSFQCSCKGGYKVDPKDSTKCLDIDECTTNP---CQQDCKNTAGSFKCSCGVGYKVDPKDKTKCLDIDEC---TAKPCQQECKNTPGSFKC-SCGVGYKVDSKDPTKCLDIDECST--KPC--QQNCKNTAGGFRCSCREGYKVDPKDSTKCSDIDECTTN----PCQQDCKNTAGSFQCSCGVGYRVDPKDLTKCLDINECT-TNPCQQD-CKNTAGSFQCSCRVGYKVDQKDSTKCLDIDECSTK-PC---QQNCKNTAGSFKC--SCNVGYKVDPKDKTKCLDIDECTTKSCQ----QNCKNTAGSFQC--SCKDGYKVDPKDKTKCLDIDECTTNP---CQQNCKNTVGSFQCSCRKGYKVDQKDSTKCLDIDECATKP---CHQNCKNTAGSFKCSCK 559 G + + +G T C G++ QG C +D+DEC PC C+N+ GSF+C C G++ P+ +++CLD+DEC P D C+NT GSF C C GY+ P C D+DECT P + CKN PGSF+C C G++ + D+DEC P C NTAGSF C+C G++ C D+DEC +P C+NT GSF+C C +G++ + ++C D+DEC A P QEC N+PGSF+C +C G+ + +C D+DECS+ PC +C NT G FRCSC GY+ C+D++EC P +C NT GSF C+C GYR P+ + CLD++EC+ + CQ C NT GSF+C C G++ D CLD+DEC + P Q C+N+ GS++C C+ GY P+ C D+DEC + Q C+NT GS++C +C GY+ P C D+DEC C+N GSFQC C +GY+ +D C+D++EC T C+N GSF C C Sbjct: 559 GRCISRPSGYTCACDSGFRLSPQGTRC-IDVDECRRVPPPCAPGRCENSPGSFRCVCGPGFRAGPR-AAECLDVDECHRVPPPCDLGRCENTPGSFLCVCPAGYQAAPHG-ASCQDVDECTQSPGLCGRGACKNLPGSFRCVCPAGFRGSACE----EDVDECAQEPPPCGPGRCDNTAGSFHCACPAGFRSR-GPGAPCQDVDECARSPPPCTYGRCENTEGSFQCVCPMGFQPN-TAGSECEDVDECENHLACP-GQECVNSPGSFQCRTCPSGHHLHRG---RCTDVDECSSGAPPCGPHGHCTNTEGSFRCSCAPGYRAPSGRPGPCADVNECLEGDFCFP-HGECLNTDGSFACTCAPGYRPGPRGAS-CLDVDECSEEDLCQSGICTNTDGSFECICPPGHRAG-PDLASCLDVDECRERGPALCGSQRCENSPGSYRCVRDCDPGYHAGPEG--TCDDVDECQEYGPEICGAQRCENTPGSYRCTPACDPGYQ--PTPGGGCQDVDECRNRSFCGAHAVCQNLPGSFQCLCDQGYE-GARDGRHCVDVNECETLQGVCGAALCENVEGSFLCVCP 1119 HSP 2 Score: 284.263 bits (726), Expect = 6.093e-79 Identity = 205/540 (37.96%), Postives = 292/540 (54.07%), Query Frame = 0 Query: 107 CKNTAGSFQCSCGVGYKVDPKDLKKCLDIDEC--TTKPCQQN-CKNTPGSFQCSCGVGYKVDPKDLTKCLDIDECTTNPCQQD---CKNTAGSFQCSCKGGYKVDPKDSTKCLDIDECTTNP---CQQDCKNTAGSFKCSCGVGYKVDPKDKTKCLDIDECTAKP---CQQECKNTPGSFKCSCGVGYKVDSKDP-TKCLDIDEC--STKPCQQN-CKNTAGGFRCSCREGYKVDPKDSTKCSDIDECTTNPC--QQDCKNTAGSFQC-SCGVGYRVDPKDLTKCLDINECTTN--PC--QQDCKNTAGSFQCSCRVGYKVDQKDSTKCLDIDECSTK----PCQQNCKNTAGSFKCSCNVGYKVDPKDKTKCLDIDECTTKS-CQQN-CKNTAGSFQCSCKDGYKVDPKDKTKCLDIDECT-TNPC---QQNCKNTVGSFQC--SCRKGYKVDQKDSTKCLDIDEC---ATKPC-HQNCKNTAGSFKC--SCKVGYKVDPKNSSKCLDIDECTTKP---CQQDCKNTAGSFQCSCRDGY 602 C + + C+C G+++ P+ +C+D+DEC PC C+N+PGSF+C CG G++ P+ +CLD+DEC P D C+NT GSF C C GY+ P ++ C D+DECT +P + CKN GSF+C C G++ ++ D+DEC +P C NT GSF C+C G++ S+ P C D+DEC S PC C+NT G F+C C G++ + ++C D+DEC + Q+C N+ GSFQC +C G+ + +C D++EC++ PC C NT GSF+CSC GY+ C D++EC P C NT GSF C+C GY+ P+ + CLD+DEC+ + CQ C NT GSF+C C G++ P D CLD+DEC P Q C+N+ GS++C C GY + + C D+DEC + C Q C+NT GS++C +C GY+ P C D+DEC + C+N GSFQC C GY Sbjct: 561 CISRPSGYTCACDSGFRLSPQG-TRCIDVDECRRVPPPCAPGRCENSPGSFRCVCGPGFRAGPR-AAECLDVDECHRVPPPCDLGRCENTPGSFLCVCPAGYQAAPHGAS-CQDVDECTQSPGLCGRGACKNLPGSFRCVCPAGFRGSACEE----DVDECAQEPPPCGPGRCDNTAGSFHCACPAGFR--SRGPGAPCQDVDECARSPPPCTYGRCENTEGSFQCVCPMGFQPN-TAGSECEDVDECENHLACPGQECVNSPGSFQCRTCPSGHHL---HRGRCTDVDECSSGAPPCGPHGHCTNTEGSFRCSCAPGYRAPSGRPGPCADVNECLEGDFCFP-HGECLNTDGSFACTCAPGYRPGPRGAS-CLDVDECSEEDLCQSGICTNTDGSFECICPPGHRAGP-DLASCLDVDECRERGPALCGSQRCENSPGSYRCVRDCDPGYHAGPEGT--CDDVDECQEYGPEICGAQRCENTPGSYRCTPACDPGYQ--PTPGGGCQDVDECRNRSFCGAHAVCQNLPGSFQCLCDQGY 1080 HSP 3 Score: 205.682 bits (522), Expect = 9.342e-54 Identity = 135/368 (36.68%), Postives = 196/368 (53.26%), Query Frame = 0 Query: 266 ECKNTPGSFKCSCGVGYKVDSKDPTKCLDIDECSTKP---CQQNCKNTAGGFRCSCREGYKVDPKDSTKCSDIDECTTNPCQQD---CKNTAGSFQCSCGVGYRVDPKDLTKCLDINECTTNPC---QQDCKNTAGSFQCSCRVGYKVDQKDSTKCLDIDECSTKP---CQQNCKNTAGSFKCSCNVGYKVDPKDKTKCLDIDECTTKS---CQQNCKNTAGSFQCSCKDGYKVDPKDKTKCLDIDECTTNPC--QQNCKNTVGSFQC-SCRKGYKVDQKDSTKCLDIDECAT--KPC--HQNCKNTAGSFKCSCKVGYKVDPKNSSKCLDIDECTTK----PCQQDCKNTAGSFQCSCRDGYRVDPK 607 C + P + C+C G+++ + T+C+D+DEC P C+N+ G FRC C G++ P+ + +C D+DEC P D C+NT GSF C C GY+ P + C D++ECT +P + CKN GSF+C C G++ + D+DEC+ +P C NTAGSF C+C G++ C D+DEC C+NT GSFQC C G++ + ++C D+DEC + Q C N+ GSFQC +C G+ + + +C D+DEC++ PC H +C NT GSF+CSC GY+ C D++EC P +C NT GSF C+C GYR P+ Sbjct: 560 RCISRPSGYTCACDSGFRLSPQG-TRCIDVDECRRVPPPCAPGRCENSPGSFRCVCGPGFRAGPR-AAECLDVDECHRVPPPCDLGRCENTPGSFLCVCPAGYQAAPHGAS-CQDVDECTQSPGLCGRGACKNLPGSFRCVCPAGFRGSACEE----DVDECAQEPPPCGPGRCDNTAGSFHCACPAGFRSR-GPGAPCQDVDECARSPPPCTYGRCENTEGSFQCVCPMGFQPN-TAGSECEDVDECENHLACPGQECVNSPGSFQCRTCPSGHHLHRG---RCTDVDECSSGAPPCGPHGHCTNTEGSFRCSCAPGYRAPSGRPGPCADVNECLEGDFCFP-HGECLNTDGSFACTCAPGYRPGPR 914 The following BLAST results are available for this feature:
BLAST of TCONS_00055927-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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