TCONS_00055936-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055936-protein
Unique NameTCONS_00055936-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length581

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055936-protein ID=TCONS_00055936-protein|Name=TCONS_00055936-protein|organism=Clytia hemisphaerica|type=polypeptide|length=581bp
MDSSNSINSETQDVDKNFLEAEHFLSNFTTLRDECERLRQESQQLDLRCQ
QLTQELQQSQIDKHNLERHIQKETLQHKEIVWNLKIELQKSQEERLLWKE
KYLDLCIRSSQNVAKDFMKTAAQKNLQQTDTDVKKSKKMKKRGKKRSLKL
EKAEPNTIELQIETTEQQLNDPNTADSLSQVLDGPSQTIEAPQPQVMTVE
LQHTDNDAMAQDPSTDLTVQHSDTTLEKLEGVEDNSDVLKTQQEVVESLN
NTENQMTEVKVMVDPMNLSTIQASTDMNHVTNIVNQLTAANNVNVSSVDS
QNQVVTSATAGYYGLQTGAFDLNAQTQGDNTTTFILQTSDTTFCTAAVIE
NPQRNEFTNSTEPPFVLKATTDNTFDAAAFTPAHPPQQVEESDTSSDENT
EFNFRCNLCNVTFSDEEMLARHMKSKHTAKTNICKDCGKAYSTKGSLAQH
VHHYHRHPNAYSCKVCGKTFNRKDFLVKHEKTHTNDREFQCKHCDKAFKT
NASLSAHVNGSHNETRRFVCDYCGMRTSWRISYLEHMKLHTGEPRKSMRR
KKVSDQLVSPQDLSQLVDNAAVVQFITTAEG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035219XLOC_035219Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055936TCONS_00055936Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 28..69
NoneNo IPR availableGENE3D3.30.160.60coord: 466..476
e-value: 7.5E-8
score: 31.9
NoneNo IPR availableGENE3D2.30.30.380coord: 445..465
e-value: 0.01
score: 15.4
NoneNo IPR availablePFAMPF12874zf-metcoord: 404..426
e-value: 3.7E-6
score: 27.0
NoneNo IPR availableGENE3D3.30.160.60coord: 477..498
e-value: 2.1E-11
score: 43.1
NoneNo IPR availableGENE3D3.30.160.60coord: 530..564
e-value: 0.0019
score: 18.1
NoneNo IPR availableGENE3D3.30.160.60coord: 499..529
e-value: 5.9E-12
score: 45.0
coord: 416..444
e-value: 7.3E-11
score: 41.5
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 434..455
e-value: 0.011
score: 16.1
coord: 461..483
e-value: 4.1E-5
score: 23.7
coord: 489..512
e-value: 2.1E-4
score: 21.4
NoneNo IPR availableGENE3D3.30.160.60coord: 358..415
e-value: 0.018
score: 14.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..149
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 432..455
e-value: 0.29
score: 20.2
coord: 461..483
e-value: 3.1E-4
score: 30.1
coord: 489..512
e-value: 0.0018
score: 27.5
coord: 404..427
e-value: 2.2E-4
score: 30.6
coord: 518..540
e-value: 0.002
score: 27.4
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 463..483
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 406..427
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 491..512
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 432..460
score: 9.764
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 461..488
score: 14.96
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 518..545
score: 10.596
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 404..432
score: 11.302
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 489..517
score: 11.697
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 469..525
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 412..470

Blast
[Close]
BLAST of TCONS_00055936-protein vs. Swiss-Prot (Human)
Match: ZN805 (Zinc finger protein 805 OS=Homo sapiens GN=ZNF805 PE=2 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 1.151e-22
Identity = 54/151 (35.76%), Postives = 77/151 (50.99%), Query Frame = 0 
Query:  404 FRCNLCNVTFSDEEMLARHMKSKHTAKTNICKDCGKAYSTKGSLAQHVHHYHRHPNAYSCKVCGKTFNRKDFLVKHEKTHTNDREFQCKHCDKAFKTNASLSAHVNGSHNETRRFVCDYCGMRTSWRISYLEHMKLHTGE-PRKSMRRKKV 553
            F+CN C   F+ + +LARH +     K   C +CGK +S    L QH H  H     Y C  CGK FNRK  L +H++ H+ ++ ++C  C KAF   ++   H N SH   + FVC  CG     R  ++ H  +H+GE P +     KV
Sbjct:  203 FKCNECEKVFNKKRLLARHERIHSGVKPYECTECGKTFSKSTYLLQH-HMVHTGEKPYKCMECGKAFNRKSHLTQHQRIHSGEKPYKCSECGKAFTHRSTFVLH-NRSHTGEKPFVCKECGKAFRDRPGFIRHYIIHSGENPYECFECGKV 351

HSP 2 Score: 88.1965 bits (217), Expect = 2.837e-18
Identity = 48/141 (34.04%), Postives = 75/141 (53.19%), Query Frame = 0 
Query:  404 FRCNLCNVTFSDEEMLARHMKSKHTAKTNICKDCGKAYSTKGSLAQHVHHYHRHPNAYSCKVCGKTFNRKDFLVKHEKTHTNDREFQCKHCDKAFKTNASLSAHVNGSHNETRRFVCDYCGMRTSWRISYLE-HMKLHTGE 543
            ++C+ C   F+       H +S    K  +CK+CGKA+  +    +H +  H   N Y C  CGK F  + +L+ H++THT ++ ++C  C KAF  +A+L  H    H   + F C  CG   + R SYL+ H ++HTGE
Sbjct:  287 YKCSECGKAFTHRSTFVLHNRSHTGEKPFVCKECGKAFRDRPGFIRH-YIIHSGENPYECFECGKVFKHRSYLMWHQQTHTGEKPYECSECGKAFCESAALIHHYV-IHTGEKPFECLECGKAFNHR-SYLKRHQRIHTGE 424

HSP 3 Score: 81.2629 bits (199), Expect = 4.124e-16
Identity = 42/140 (30.00%), Postives = 66/140 (47.14%), Query Frame = 0 
Query:  404 FRCNLCNVTFSDEEMLARHMKSKHTAKTNICKDCGKAYSTKGSLAQHVHHYHRHPNAYSCKVCGKTFNRKDFLVKHEKTHTNDREFQCKHCDKAFKTNASLSAHVNGSHNETRRFVCDYCGMRTSWRISYLEHMKLHTGE 543
            F C  C   F+    L RH +     K  +C +CGKA++   +   H    H     + CK CGK F+ +  L++H   HT ++ ++C  C KAF   + L+ H    H+  + + C  CG    W  + + H  +HTGE
Sbjct:  399 FECLECGKAFNHRSYLKRHQRIHTGEKPYVCSECGKAFTHCSTFILHKR-AHTGEKPFECKECGKAFSNRADLIRHFSIHTGEKPYECMECGKAFNRRSGLTRHQR-IHSGEKPYECIECGKTFCWSTNLIRHSIIHTGE 536
The following BLAST results are available for this feature:
BLAST of TCONS_00055936-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN8051.151e-2235.76Zinc finger protein 805 OS=Homo sapiens GN=ZNF805 ... [more]
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