TCONS_00055938-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055938-protein
Unique NameTCONS_00055938-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length640

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055938-protein ID=TCONS_00055938-protein|Name=TCONS_00055938-protein|organism=Clytia hemisphaerica|type=polypeptide|length=640bp
MDFQFELNFDDVFEGTDHIKNEDHIIEDTTFAEETLNISNEDIKIKEPPL
SLYDIRKDEDEEDQSSLDLKPDVDIALKPEENDDTSMGMQDSSINEQICQ
SVNDVSELANPFLSANKNNEVVIKKEPIEDEFIDNKEPPLLENIKEEVHW
EEGYGVDSSAASSSTGAANFNRKSLKKLNVQQRQDINNKSATKDYYIYVN
PRGKLKKRKKWKFDVNVAVEFIDLKSIEDMKRDPEKWKGVMKTKVERNKK
EKQKLNVVKKKKKKEKKDKKDKKKQKSLNIETAEINIKVEPSSTVIKQEP
QDDIGTQKPKRKNPHRPVPRVRCKYCNLLFSSQSYLTVHERIHTGEKPYE
CDVCHKKFNSRHSLNLHKKSHSNERKFECEVCHILLKNKLTYNEHLNIHT
GAKPYKCETCGKRFAQSSVYRLHIKIHTGIKQFKCEYCDKSFRQKITMQN
HVYAIHTHEKPFPCTLCEKKFHRSDALLMHMRMHQDIKLWQCKICALKFR
TTSCLNRHMTTHTKQKRFKCDKCDFEAARKDSLATHYRTHTGERPYKCEL
CEMTFATLSTRKLHMRRHTGEKPHECPVCKYRFTESSGLRRHLRRMHLRY
FEEMEEKRIRKKERLEKTIENNLARIQEEAIKESEKESGQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035221XLOC_035221Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055938TCONS_00055938Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 245..286
NoneNo IPR availableCOILSCoilCoilcoord: 601..636
NoneNo IPR availableGENE3D3.30.160.60coord: 502..526
e-value: 4.6E-13
score: 48.6
NoneNo IPR availableGENE3D3.30.160.60coord: 430..444
e-value: 9.3E-7
score: 28.4
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 349..372
e-value: 2.3E-5
score: 24.1
coord: 462..486
e-value: 0.0013
score: 18.6
NoneNo IPR availableGENE3D3.30.160.60coord: 274..329
e-value: 0.0061
score: 16.1
NoneNo IPR availableGENE3D2.20.25.10coord: 343..354
e-value: 5.4E-5
score: 22.6
NoneNo IPR availableGENE3D3.30.160.60coord: 330..342
e-value: 4.8E-10
score: 38.7
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 405..427
e-value: 6.5E-4
score: 19.9
coord: 546..568
e-value: 0.0036
score: 17.6
coord: 322..343
e-value: 0.0019
score: 18.5
coord: 518..540
e-value: 0.016
score: 15.5
coord: 574..597
e-value: 8.0E-4
score: 19.6
coord: 433..453
e-value: 0.0026
score: 18.0
coord: 491..512
e-value: 0.02
score: 15.2
NoneNo IPR availablePFAMPF12874zf-metcoord: 377..399
e-value: 0.029
score: 14.7
NoneNo IPR availableGENE3D3.30.160.60coord: 445..476
e-value: 3.2E-15
score: 55.7
NoneNo IPR availableGENE3D3.30.160.60coord: 544..562
e-value: 1.3E-12
score: 46.9
NoneNo IPR availableGENE3D3.30.160.60coord: 585..616
e-value: 1.1E-5
score: 24.8
NoneNo IPR availableGENE3D3.30.160.60coord: 563..584
e-value: 2.3E-12
score: 46.2
coord: 477..501
e-value: 3.7E-10
score: 39.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 291..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..279
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 321..343
e-value: 0.043
score: 23.0
coord: 405..427
e-value: 0.0017
score: 27.7
coord: 574..597
e-value: 5.9E-4
score: 29.1
coord: 377..399
e-value: 0.36
score: 19.9
coord: 433..456
e-value: 3.5E-4
score: 29.9
coord: 490..512
e-value: 0.023
score: 23.9
coord: 462..484
e-value: 9.7E-4
score: 28.4
coord: 518..540
e-value: 0.0056
score: 25.9
coord: 546..568
e-value: 0.0039
score: 26.4
coord: 349..371
e-value: 0.0024
score: 27.1
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 379..399
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 464..484
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 351..371
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 548..568
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 435..456
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 576..597
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 323..343
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 407..427
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 492..512
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 405..432
score: 14.087
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 490..517
score: 11.24
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 574..597
score: 10.325
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 518..545
score: 13.734
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 377..404
score: 10.72
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 321..348
score: 14.461
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 349..376
score: 13.671
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 462..489
score: 11.593
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 546..573
score: 14.087
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 433..461
score: 14.066
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 414..471
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 322..371
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 529..579
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 358..414
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 456..508
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 572..598
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 375..410
e-value: 1.2E-15
score: 57.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 527..543
e-value: 7.8E-11
score: 41.3
coord: 411..429
e-value: 2.7E-17
score: 62.0
coord: 355..374
e-value: 8.0E-13
score: 47.7

Blast
BLAST of TCONS_00055938-protein vs. Swiss-Prot (Human)
Match: ZN595 (Zinc finger protein 595 OS=Homo sapiens GN=ZNF595 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 1.239e-65
Identity = 119/271 (43.91%), Postives = 160/271 (59.04%), Query Frame = 0
Query:  322 RCKYCNLLFSSQSYLTVHERIHTGEKPYECDVCHKKFNSRHSLNLHKKSHSNERKFECEVCHILLKNKLTYNEHLNIHTGAKPYKCETCGKRFAQSSVYRLHIKIHTGIKQFKCEYCDKSFRQKITMQNHVYAIHTHEKPFPCTLCEKKFHRSDALLMHMRMHQDIKLWQCKICALKFRTTSCLNRHMTTHTKQKRFKCDKCDFEAARKDSLATHYRTHTGERPYKCELCEMTFATLSTRKLHMRRHTGEKPHECPVCKYRFTESSGLRRH 592
            +C+ C   F+  + L+ H+RIHTGEKPY C+ C K F     LN HKK H+ E+ ++CE C        T NEH  IHTG KPYKC+ CGK F  S+    H  IHTG K +KC+ C K+FRQ  ++  H   IHT EKP+ C  C K F++S +L++H  +H + KL++C+ C   F  +S LN+H   HT +K + C++C     R   LA H R HTGE+PY CE C   F   ST  LH R H+G+KP++C  C   FT S+ L  H
Sbjct:  201 KCEKCGKAFNRSTSLSKHKRIHTGEKPYTCEECGKAFRRSTVLNEHKKIHTGEKPYKCEECGKAFTRSTTLNEHKKIHTGEKPYKCKECGKAFRWSTSMNEHKNIHTGEKPYKCKECGKAFRQSRSLNEHK-NIHTGEKPYTCEKCGKAFNQSSSLIIHRSIHSEQKLYKCEECGKAFTWSSSLNKHKRIHTGEKPYACEECGKAFYRSSHLAKHKRIHTGEKPYTCEECGKAFNQSSTLILHKRIHSGQKPYKCEECGKAFTRSTTLNEH 470          

HSP 2 Score: 213.772 bits (543), Expect = 1.066e-60
Identity = 124/315 (39.37%), Postives = 170/315 (53.97%), Query Frame = 0
Query:  322 RCKYCNLLFSSQSYLTVHERIHTGEKPYECDVCHKKFNSRHSLNLHKKSHSNERKFECEVCHILLKNKLTYNEHLNIHTGAKPYKCETCGKRFAQSSVYRLHIKIHTGIKQFKCEYCDKSFRQKITMQNHVYAIHTHEKPFPCTLCEKKFHRSDALLMHMRMHQDIKLWQCKICALKFRTTSCLNRHMTTHTKQKRFKCDKCDFEAARKDSLATHYRTHTGERPYKCELCEMTFATLSTRKLHMRRHTGEKPHECPVCKYRFTESSGLRRHLRRMHLRYFEEMEEKRIRKKERLEKTIENNLARIQEEAIKESEK 636
            +C+ C   F+  + L  H++IHTGEKPY+C  C K F    S+N HK  H+ E+ ++C+ C    +   + NEH NIHTG KPY CE CGK F QSS   +H  IH+  K +KCE C K+F    ++  H   IHT EKP+ C  C K F+RS  L  H R+H   K + C+ C   F  +S L  H   H+ QK +KC++C     R  +L  H + HTGE+PYKCE C   F   ++   H   HTGEKP++C  C   F +SSGL  H R +H        E+++ K E   K    + A  + + I   EK
Sbjct:  257 KCEECGKAFTRSTTLNEHKKIHTGEKPYKCKECGKAFRWSTSMNEHKNIHTGEKPYKCKECGKAFRQSRSLNEHKNIHTGEKPYTCEKCGKAFNQSSSLIIHRSIHSEQKLYKCEECGKAFTWSSSLNKHK-RIHTGEKPYACEECGKAFYRSSHLAKHKRIHTGEKPYTCEECGKAFNQSSTLILHKRIHSGQKPYKCEECGKAFTRSTTLNEHKKIHTGEKPYKCEECGKAFIWSASLNEHKNIHTGEKPYKCKECGKAFNQSSGLIIH-RSIH-------SEQKLYKCEECGKAFTRSTALNEHKKIHSGEK 562          

HSP 3 Score: 201.445 bits (511), Expect = 3.280e-56
Identity = 111/276 (40.22%), Postives = 151/276 (54.71%), Query Frame = 0
Query:  322 RCKYCNLLFSSQSYLTVHERIHTGEKPYECDVCHKKFNSRHSLNLHKKSHSNERKFECEVCHILLKNKLTYNEHLNIHTGAKPYKCETCGKRFAQSSVYRLHIKIHTGIKQFKCEYCDKSFRQKITMQNHVYAIHTHEKPFPCTLCEKKFHRSDALLMHMRMHQDIKLWQCKICALKFRTTSCLNRHMTTHTKQKRFKCDKCDFEAARKDSLATHYRTHTGERPYKCELCEMTFATLSTRKLHMRRHTGEKPHECPVCKYRFTESSGLRRHLRRMH 597
            +C+ C   F+  S L  H+RIHTGEKPY C+ C K F     L  HK+ H+ E+ + CE C        T   H  IH+G KPYKCE CGK F +S+    H KIHTG K +KCE C K+F    ++  H   IHT EKP+ C  C K F++S  L++H  +H + KL++C+ C   F  ++ LN H   H+ +K +KC +C        +L  H R HTGE+P+ CE C   F   S+   H   HTGEK ++C  C   F   S L  H +R+H
Sbjct:  369 KCEECGKAFTWSSSLNKHKRIHTGEKPYACEECGKAFYRSSHLAKHKRIHTGEKPYTCEECGKAFNQSSTLILHKRIHSGQKPYKCEECGKAFTRSTTLNEHKKIHTGEKPYKCEECGKAFIWSASLNEHK-NIHTGEKPYKCKECGKAFNQSSGLIIHRSIHSEQKLYKCEECGKAFTRSTALNEHKKIHSGEKPYKCKECGKAYNLSSTLTKHKRIHTGEKPFTCEECGKAFNWSSSLTKHKIIHTGEKSYKCEECGKAFNRPSTLTVH-KRIH 642          

HSP 4 Score: 200.675 bits (509), Expect = 6.468e-56
Identity = 120/314 (38.22%), Postives = 161/314 (51.27%), Query Frame = 0
Query:  279 NIETAEINIKVEPSSTVIKQEPQDDIGTQKPKRKNPHRPVPRVRCKYCNLLFSSQSYLTVHERIHTGEKPYECDVCHKKFNSRHSLNLHKKSHSNERKFECEVCHILLKNKLTYNEHLNIHTGAKPYKCETCGKRFAQSSVYRLHIKIHTGIKQFKCEYCDKSFRQKITMQNHVYAIHTHEKPFPCTLCEKKFHRSDALLMHMRMHQDIKLWQCKICALKFRTTSCLNRHMTTHTKQKRFKCDKCDFEAARKDSLATHYRTHTGERPYKCELCEMTFATLSTRKLHMRRHTGEKPHECPVCKYRFTESSGLRRH 592
            NI T E   K +      +Q    +      + KN H       C+ C   F+  S L +H  IH+ +K Y+C+ C K F    SLN HK+ H+ E+ + CE C           +H  IHTG KPY CE CGK F QSS   LH +IH+G K +KCE C K+F +  T+  H   IHT EKP+ C  C K F  S +L  H  +H   K ++CK C   F  +S L  H + H++QK +KC++C     R  +L  H + H+GE+PYKC+ C   +   ST   H R HTGEKP  C  C   F  SS L +H
Sbjct:  304 NIHTGEKPYKCKECGKAFRQSRSLN------EHKNIHTGEKPYTCEKCGKAFNQSSSLIIHRSIHSEQKLYKCEECGKAFTWSSSLNKHKRIHTGEKPYACEECGKAFYRSSHLAKHKRIHTGEKPYTCEECGKAFNQSSTLILHKRIHSGQKPYKCEECGKAFTRSTTLNEHK-KIHTGEKPYKCEECGKAFIWSASLNEHKNIHTGEKPYKCKECGKAFNQSSGLIIHRSIHSEQKLYKCEECGKAFTRSTALNEHKKIHSGEKPYKCKECGKAYNLSSTLTKHKRIHTGEKPFTCEECGKAFNWSSSLTKH 610          

HSP 5 Score: 193.741 bits (491), Expect = 2.156e-53
Identity = 107/248 (43.15%), Postives = 138/248 (55.65%), Query Frame = 0
Query:  323 CKYCNLLFSSQSYLTVHERIHTGEKPYECDVCHKKFNSRHSLNLHKKSHSNERKFECEVCHILLKNKLTYNEHLNIHTGAKPYKCETCGKRFAQSSVYRLHIKIHTGIKQFKCEYCDKSFRQKITMQNHVYAIHTHEKPFPCTLCEKKFHRSDALLMHMRMHQDIKLWQCKICALKFRTTSCLNRHMTTHTKQKRFKCDKCDFEAARKDSLATHYRTHTGERPYKCELCEMTFATLSTRKLHMRRHTG 570
            C+ C   F   S+L  H+RIHTGEKPY C+ C K FN   +L LHK+ HS ++ ++CE C        T NEH  IHTG KPYKCE CGK F  S+    H  IHTG K +KC+ C K+F Q   +  H  +IH+ +K + C  C K F RS AL  H ++H   K ++CK C   +  +S L +H   HT +K F C++C        SL  H   HTGE+ YKCE C   F   ST  +H R HTG
Sbjct:  398 CEECGKAFYRSSHLAKHKRIHTGEKPYTCEECGKAFNQSSTLILHKRIHSGQKPYKCEECGKAFTRSTTLNEHKKIHTGEKPYKCEECGKAFIWSASLNEHKNIHTGEKPYKCKECGKAFNQSSGLIIH-RSIHSEQKLYKCEECGKAFTRSTALNEHKKIHSGEKPYKCKECGKAYNLSSTLTKHKRIHTGEKPFTCEECGKAFNWSSSLTKHKIIHTGEKSYKCEECGKAFNRPSTLTVHKRIHTG 644          

HSP 6 Score: 168.703 bits (426), Expect = 1.333e-44
Identity = 100/255 (39.22%), Postives = 139/255 (54.51%), Query Frame = 0
Query:  344 TGEKPYECDVCHKKFNSRHSLNLHKKSHSNERKFECEVC-HILLKNKLTYNEHLNIHTGAKPYKCETCGKRFAQSSVYRLHIKIHTGIKQFKCEYCDKSFRQKITMQNHVYAIHTHEKPFPCTLCEKKFHRSDALLMHMRMHQDIKLWQCKICALKFRTTSCLNRHMTTHTKQKRFKCDKCDFEAARKDSLATHYRTHTGERPYKCELCEMTFATLSTRKLHMRRHTGEKPHECPVCKYRFTESSGLRRHLRRMH 597
            T  K ++C+ C K F+   + N HK  H+ E+ F+C  C      + LT  +H  IH G KPYKCE CGK F +S+    H +IHTG K + CE C K+FR+   +  H   IHT EKP+ C  C K F RS  L  H ++H   K ++CK C   FR ++ +N H   HT +K +KC +C     +  SL  H   HTGE+PY CE C   F   S+  +H   H+ +K ++C  C   FT SS L +H +R+H
Sbjct:  140 TQSKIFQCNTCVKVFSKFSNSNKHKIRHTGEKPFKCTECGRSFYMSHLT--QHTGIHAGEKPYKCEKCGKAFNRSTSLSKHKRIHTGEKPYTCEECGKAFRRSTVLNEHK-KIHTGEKPYKCEECGKAFTRSTTLNEHKKIHTGEKPYKCKECGKAFRWSTSMNEHKNIHTGEKPYKCKECGKAFRQSRSLNEHKNIHTGEKPYTCEKCGKAFNQSSSLIIHRSIHSEQKLYKCEECGKAFTWSSSLNKH-KRIH 390          
The following BLAST results are available for this feature:
BLAST of TCONS_00055938-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN5951.239e-6543.91Zinc finger protein 595 OS=Homo sapiens GN=ZNF595 ... [more]
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