Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00055962-protein ID=TCONS_00055962-protein|Name=TCONS_00055962-protein|organism=Clytia hemisphaerica|type=polypeptide|length=545bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00055962-protein vs. Swiss-Prot (Human)
Match: SACS (Sacsin OS=Homo sapiens GN=SACS PE=1 SV=2) HSP 1 Score: 266.159 bits (679), Expect = 2.362e-77 Identity = 171/503 (34.00%), Postives = 265/503 (52.68%), Query Frame = 0 Query: 14 VVDEIKAILQQYPDDGQIFKEIIQNAEDARASEIVFVFDKNVDQDADLHFSEEKLRRYQIPSLYAYNNASFTPADWDGVISLGISGKTKQALKVGRFGLGFKSVFHLTDLPCVASDSTFAYLDPMKETF--KEEVEVLDFDEPTDSDADFHD-FKSFQRL-GEKFWRNENG-VEGTLFRLPLRLKASNLSSVIYDEERINALLERFKEEAHTTMIFLKHVKSIKIYTIENGSTVMKEVYSAKLTEHSQEYQSLKVDFVEQINRLVDEEQDFA------TIKQLRHFLEIEVESLDEDEEEEEQIYEYAVCERYGYEGTNEDFISLMYDEELSYVPLVAIAYPINQDLDEG--------GHVFCTLPLPLHCRKMTGMPVHVNGFFALGQDRKDLKWKSLSTQGSSNDKTVNWNVYLLTELIPIVYSDL-FDFLKTLEIE--------IDVLYKAWPDQNEIDSKWRPILDLFHALMREKDFIYVGFQDTWYKTQNVRFIKTDE 488 +VD +K IL++YP+ GQI KE+IQNAEDA A+E+ F++D+ Q + + YQ P+LY YNNA FTP DW G+ + S K LKVGRFG+GF SV+H+TD+PC+ S LDP + F E + + + + ++ D F F + G NG GT FR PLRL+ S LSS +Y+++++ L E F+ +A T ++FLK V+ + +Y E T E ++T S E ++LK + I L ++ I + + + I L+E+ ++ Q + VC G G + SL +EL +VP++ IA P++ DE G FC LPLP TG+PVH++GFF L +R+ +KW+ L D WN +L+ ++P Y+ L D +K LE+E +DV+YK WP+ +++ W+P+L+ + + + IY D W + + V F + DE Sbjct: 96 LVDFLKDILRRYPEGGQILKELIQNAEDAGATEVKFLYDET--QYGTETLWSKDMAPYQGPALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGMLDPHQTLFGPHESGQCWNLKDDSKEISELSDQFAPFVGIFGSTKETFINGNFPGTFFRFPLRLQPSQLSSNLYNKQKVLELFESFRADADTVLLFLKSVQDVSLYVREADGT---EKLVFRVT--SSESKALKHERPNSIKILGTAISNYCKKTPSNNITCVTYHVNI---VLEEESTKDAQKTSWLVCNSVGGRGISSKLDSLA--DELKFVPIIGIAMPLSSRDDEAKGATSDFSGKAFCFLPLPPGEESSTGLPVHISGFFGLTDNRRSIKWRELDQW---RDPAALWNEFLVMNVVPKAYATLILDSIKRLEMEKSSDFPLSVDVIYKLWPEASKVKVHWQPVLEPLFSELLQNAVIYSISCD-WVRLEQVYFSELDE 582 HSP 2 Score: 173.711 bits (439), Expect = 7.013e-46 Identity = 124/430 (28.84%), Postives = 205/430 (47.67%), Query Frame = 0 Query: 10 KRRTVVDEIKAILQQYPDDGQIFKEIIQNAEDARASEIVFVFDKNVDQDADLHFSEEKLRRYQIPSLYAYNNASFTPADWDGVISLGISGKTKQALKVGRFGLGFKSVFHLTDLPC-VASDSTFAYLDPMKETFKEEVEVLDFDEPTDSDADFHDFKSFQRLGEKFWRNENGVEG-TLFRLPLR----LKASNLSSVIYDEERINALLERFKEEAHTTMIFLKHVKSIKIYTIENGSTVMKEVYSAKLTEHSQEYQSLKVDFVEQINRLVDEEQDFATIKQLRHFLEIEVESLD---EDEEEEEQIYEYAVCERYGY---EGTNEDFISLMYDEELSYVPLVAIAYPINQDLDEGGHVFCTLPLPLHCRKMTGMPVHVNGFFALGQDRKDLKWKSLSTQGSSNDKTVNWNVYLLTELIPIVYSDLFDFLK 427 ++ + IK+IL YP + ++ KE++QNA+DA+A+EI FVFD D F ++K Q P+L YNN FT D G+ +LG K K G++G+GF SV+H+TD P ++ + DP + D DADF F + + + ++ T+FR PLR K S +SSV + + LL++ + + ++FL H++ I I I+ + + +YS K K+ +++ R ++ + R +I V+ + + E+ E + + +C R G+ E ++ IS +++++ P +A I + + FC LPL L TG+P HVNG FAL R++L W+ + G +D WN L+T LI Y +L LK Sbjct: 2524 QKEKLTSRIKSILNAYPSEKEMLKELLQNADDAKATEICFVFDPR-QHPVDRIF-DDKWAPLQGPALCVYNNQPFTEDDVRGIQNLGKGTKEGNPYKTGQYGIGFNSVYHITDCPSFISGNDILCIFDPHARYAPGATSISPGRMFRDLDADFR--TQFSDVLDLYLGTHFKLDNCTMFRFPLRNAEMAKVSEISSVPASDRMVQNLLDKLRSDGAELLMFLNHMEKISICEIDKSTGALNVLYSVK----------GKITDGDRLKRKQFHASVIDSVTKKRQLKDIPVQQITYTMDTEDSEGNLTTWLICNRSGFSSMEKVSKSVISAHKNQDITLFPRGGVAACITHNYKKPHRAFCFLPLSLE----TGLPFHVNGHFALDSARRNL-WRDDNGVGVRSD----WNNSLMTALIAPAYVELLIQLK 2930 HSP 3 Score: 148.288 bits (373), Expect = 1.659e-37 Identity = 143/555 (25.77%), Postives = 237/555 (42.70%), Query Frame = 0 Query: 10 KRRTVVDEIKAILQQYPDDGQIFKEIIQNAEDARASEIVFVFDKNVDQDADLHFSEEKLRRYQIPSLYAYNNASFTPADWDGVISLGISGKTKQALKVGRFGLGFKSVFHLTDLPCVASDSTFAYLDPMKETFKEEVEVLDFDEPTDSDADFHDFKSFQRLGEKF--WRNENGVE------------GTLFRLPLRL----KASNLSSVIYDEERINALLERFKEEAHTTMIFLKHVKS--IKIYTIE--NGSTVMKEVYSAKLTEHSQEYQSLKVDFVEQINRLV-----------DEEQDFATIKQL---------RHFLEIEVESLDEDEEEEEQIYEYAVC----------ERYGYEGTNEDFISLMYDEE------------LSYVPLVAIAYPINQDLDEG-------GHVFCTLPLPLHCRKMTGMPVHVNGFFALGQDRKDLKWKSLSTQGSSNDKTVNWNVYLLTELIPIVYSDLFDFLKTLEIEIDVL----YKAWPDQNEIDSKWRPILDLFH---ALMREKDFIYVGFQD--TWYKTQNVRFI 484 +R + IK IL++YP IFKE++QNA+DA A+E F+ D + D + + + P+L+++NN+ F+ +D+ + LG S K + KVG+FGLGF SV+H+TD+P + S DP + ++ D P K ++ +F + + G + GTLFRL R K S +SS Y+ I +L++ F H +IF + VKS +K IE N S V K + S+ + + +++ +L+ +E + I Q+ R +++ +++ ++E A + E T + M E L VP A+ +++ D+ G VFC LPL R TG+PVH+NG FA+ +RK++ WK+ D WN + +I Y + L+ L +++ Y WPD + + + I F+ A + K+ V F D TW +NVRF+ Sbjct: 1456 QREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECSFLIDMRRNMDIRENLLDPGMAACHGPALWSFNNSQFSDSDFVNITRLGESLKRGEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHISKHIK--DKSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLTVEAPYSYNGTLFRLSFRTQQEAKVSEVSSTCYNTADIYSLVDEFSLCGHRLIIFTQSVKSMYLKYLKIEETNPSLAQDTVIIKKKSCSSKALNTPVLSVLKEAAKLMKTCSSSNKKLPSDEPKSSCILQITVEEFHHVFRRIADLQSPLFRGPDDDPAALFEMAKSGQSKKPSDELSQKTVECTTWLLCTCMDTGEALKFSLSESGRRLGLVPCGAVGVQLSEIQDQKWTVKPHIGEVFCYLPL----RIKTGLPVHINGCFAVTSNRKEI-WKT--------DTKGRWNTTFMRHVIVKAYLQVLSVLRDLATSGELMDYTYYAVWPDPDLVHDDFSVICQGFYEDIAHGKGKELTKV-FSDGSTWVSMKNVRFL 1994 The following BLAST results are available for this feature:
BLAST of TCONS_00055962-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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