TCONS_00055962-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055962-protein
Unique NameTCONS_00055962-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length545

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055962-protein ID=TCONS_00055962-protein|Name=TCONS_00055962-protein|organism=Clytia hemisphaerica|type=polypeptide|length=545bp
MYKQKREKFKRRTVVDEIKAILQQYPDDGQIFKEIIQNAEDARASEIVFV
FDKNVDQDADLHFSEEKLRRYQIPSLYAYNNASFTPADWDGVISLGISGK
TKQALKVGRFGLGFKSVFHLTDLPCVASDSTFAYLDPMKETFKEEVEVLD
FDEPTDSDADFHDFKSFQRLGEKFWRNENGVEGTLFRLPLRLKASNLSSV
IYDEERINALLERFKEEAHTTMIFLKHVKSIKIYTIENGSTVMKEVYSAK
LTEHSQEYQSLKVDFVEQINRLVDEEQDFATIKQLRHFLEIEVESLDEDE
EEEEQIYEYAVCERYGYEGTNEDFISLMYDEELSYVPLVAIAYPINQDLD
EGGHVFCTLPLPLHCRKMTGMPVHVNGFFALGQDRKDLKWKSLSTQGSSN
DKTVNWNVYLLTELIPIVYSDLFDFLKTLEIEIDVLYKAWPDQNEIDSKW
RPILDLFHALMREKDFIYVGFQDTWYKTQNVRFIKTDEMTGDELSAVEEL
LVSTNIPFAIAPQAITDRLPCHWINSYEVNRLIIGYSIFIRLPMG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035227XLOC_035227Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055962TCONS_00055962Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003594HATPase_C
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003594Histidine kinase-like ATPase, C-terminal domainGENE3D3.30.565.10coord: 2..316
e-value: 7.6E-14
score: 51.2
IPR003594Histidine kinase-like ATPase, C-terminal domainSUPERFAMILY55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 19..129
coord: 182..208

Blast
BLAST of TCONS_00055962-protein vs. Swiss-Prot (Human)
Match: SACS (Sacsin OS=Homo sapiens GN=SACS PE=1 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 2.362e-77
Identity = 171/503 (34.00%), Postives = 265/503 (52.68%), Query Frame = 0
Query:   14 VVDEIKAILQQYPDDGQIFKEIIQNAEDARASEIVFVFDKNVDQDADLHFSEEKLRRYQIPSLYAYNNASFTPADWDGVISLGISGKTKQALKVGRFGLGFKSVFHLTDLPCVASDSTFAYLDPMKETF--KEEVEVLDFDEPTDSDADFHD-FKSFQRL-GEKFWRNENG-VEGTLFRLPLRLKASNLSSVIYDEERINALLERFKEEAHTTMIFLKHVKSIKIYTIENGSTVMKEVYSAKLTEHSQEYQSLKVDFVEQINRLVDEEQDFA------TIKQLRHFLEIEVESLDEDEEEEEQIYEYAVCERYGYEGTNEDFISLMYDEELSYVPLVAIAYPINQDLDEG--------GHVFCTLPLPLHCRKMTGMPVHVNGFFALGQDRKDLKWKSLSTQGSSNDKTVNWNVYLLTELIPIVYSDL-FDFLKTLEIE--------IDVLYKAWPDQNEIDSKWRPILDLFHALMREKDFIYVGFQDTWYKTQNVRFIKTDE 488
            +VD +K IL++YP+ GQI KE+IQNAEDA A+E+ F++D+   Q        + +  YQ P+LY YNNA FTP DW G+  +  S K    LKVGRFG+GF SV+H+TD+PC+ S      LDP +  F   E  +  +  + +   ++  D F  F  + G       NG   GT FR PLRL+ S LSS +Y+++++  L E F+ +A T ++FLK V+ + +Y  E   T   E    ++T  S E ++LK +    I  L     ++        I  + + + I    L+E+  ++ Q   + VC   G  G +    SL   +EL +VP++ IA P++   DE         G  FC LPLP      TG+PVH++GFF L  +R+ +KW+ L       D    WN +L+  ++P  Y+ L  D +K LE+E        +DV+YK WP+ +++   W+P+L+   + + +   IY    D W + + V F + DE
Sbjct:   96 LVDFLKDILRRYPEGGQILKELIQNAEDAGATEVKFLYDET--QYGTETLWSKDMAPYQGPALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGMLDPHQTLFGPHESGQCWNLKDDSKEISELSDQFAPFVGIFGSTKETFINGNFPGTFFRFPLRLQPSQLSSNLYNKQKVLELFESFRADADTVLLFLKSVQDVSLYVREADGT---EKLVFRVT--SSESKALKHERPNSIKILGTAISNYCKKTPSNNITCVTYHVNI---VLEEESTKDAQKTSWLVCNSVGGRGISSKLDSLA--DELKFVPIIGIAMPLSSRDDEAKGATSDFSGKAFCFLPLPPGEESSTGLPVHISGFFGLTDNRRSIKWRELDQW---RDPAALWNEFLVMNVVPKAYATLILDSIKRLEMEKSSDFPLSVDVIYKLWPEASKVKVHWQPVLEPLFSELLQNAVIYSISCD-WVRLEQVYFSELDE 582          

HSP 2 Score: 173.711 bits (439), Expect = 7.013e-46
Identity = 124/430 (28.84%), Postives = 205/430 (47.67%), Query Frame = 0
Query:   10 KRRTVVDEIKAILQQYPDDGQIFKEIIQNAEDARASEIVFVFDKNVDQDADLHFSEEKLRRYQIPSLYAYNNASFTPADWDGVISLGISGKTKQALKVGRFGLGFKSVFHLTDLPC-VASDSTFAYLDPMKETFKEEVEVLDFDEPTDSDADFHDFKSFQRLGEKFWRNENGVEG-TLFRLPLR----LKASNLSSVIYDEERINALLERFKEEAHTTMIFLKHVKSIKIYTIENGSTVMKEVYSAKLTEHSQEYQSLKVDFVEQINRLVDEEQDFATIKQLRHFLEIEVESLD---EDEEEEEQIYEYAVCERYGY---EGTNEDFISLMYDEELSYVPLVAIAYPINQDLDEGGHVFCTLPLPLHCRKMTGMPVHVNGFFALGQDRKDLKWKSLSTQGSSNDKTVNWNVYLLTELIPIVYSDLFDFLK 427
            ++  +   IK+IL  YP + ++ KE++QNA+DA+A+EI FVFD       D  F ++K    Q P+L  YNN  FT  D  G+ +LG   K     K G++G+GF SV+H+TD P  ++ +      DP          +       D DADF     F  + + +      ++  T+FR PLR     K S +SSV   +  +  LL++ + +    ++FL H++ I I  I+  +  +  +YS K           K+   +++ R         ++ + R   +I V+ +    + E+ E  +  + +C R G+   E  ++  IS   +++++  P   +A  I  +  +    FC LPL L     TG+P HVNG FAL   R++L W+  +  G  +D    WN  L+T LI   Y +L   LK
Sbjct: 2524 QKEKLTSRIKSILNAYPSEKEMLKELLQNADDAKATEICFVFDPR-QHPVDRIF-DDKWAPLQGPALCVYNNQPFTEDDVRGIQNLGKGTKEGNPYKTGQYGIGFNSVYHITDCPSFISGNDILCIFDPHARYAPGATSISPGRMFRDLDADFR--TQFSDVLDLYLGTHFKLDNCTMFRFPLRNAEMAKVSEISSVPASDRMVQNLLDKLRSDGAELLMFLNHMEKISICEIDKSTGALNVLYSVK----------GKITDGDRLKRKQFHASVIDSVTKKRQLKDIPVQQITYTMDTEDSEGNLTTWLICNRSGFSSMEKVSKSVISAHKNQDITLFPRGGVAACITHNYKKPHRAFCFLPLSLE----TGLPFHVNGHFALDSARRNL-WRDDNGVGVRSD----WNNSLMTALIAPAYVELLIQLK 2930          

HSP 3 Score: 148.288 bits (373), Expect = 1.659e-37
Identity = 143/555 (25.77%), Postives = 237/555 (42.70%), Query Frame = 0
Query:   10 KRRTVVDEIKAILQQYPDDGQIFKEIIQNAEDARASEIVFVFDKNVDQDADLHFSEEKLRRYQIPSLYAYNNASFTPADWDGVISLGISGKTKQALKVGRFGLGFKSVFHLTDLPCVASDSTFAYLDPMKETFKEEVEVLDFDEPTDSDADFHDFKSFQRLGEKF--WRNENGVE------------GTLFRLPLRL----KASNLSSVIYDEERINALLERFKEEAHTTMIFLKHVKS--IKIYTIE--NGSTVMKEVYSAKLTEHSQEYQSLKVDFVEQINRLV-----------DEEQDFATIKQL---------RHFLEIEVESLDEDEEEEEQIYEYAVC----------ERYGYEGTNEDFISLMYDEE------------LSYVPLVAIAYPINQDLDEG-------GHVFCTLPLPLHCRKMTGMPVHVNGFFALGQDRKDLKWKSLSTQGSSNDKTVNWNVYLLTELIPIVYSDLFDFLKTLEIEIDVL----YKAWPDQNEIDSKWRPILDLFH---ALMREKDFIYVGFQD--TWYKTQNVRFI 484
            +R  +   IK IL++YP    IFKE++QNA+DA A+E  F+ D   + D   +  +  +     P+L+++NN+ F+ +D+  +  LG S K  +  KVG+FGLGF SV+H+TD+P + S       DP      + ++  D   P          K  ++   +F  + +  G +            GTLFRL  R     K S +SS  Y+   I +L++ F    H  +IF + VKS  +K   IE  N S     V   K +  S+   +  +  +++  +L+            +E   + I Q+         R   +++       +++   ++E A             +   E T     + M   E            L  VP  A+   +++  D+        G VFC LPL    R  TG+PVH+NG FA+  +RK++ WK+        D    WN   +  +I   Y  +   L+ L    +++    Y  WPD + +   +  I   F+   A  + K+   V F D  TW   +NVRF+
Sbjct: 1456 QREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECSFLIDMRRNMDIRENLLDPGMAACHGPALWSFNNSQFSDSDFVNITRLGESLKRGEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHISKHIK--DKSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLTVEAPYSYNGTLFRLSFRTQQEAKVSEVSSTCYNTADIYSLVDEFSLCGHRLIIFTQSVKSMYLKYLKIEETNPSLAQDTVIIKKKSCSSKALNTPVLSVLKEAAKLMKTCSSSNKKLPSDEPKSSCILQITVEEFHHVFRRIADLQSPLFRGPDDDPAALFEMAKSGQSKKPSDELSQKTVECTTWLLCTCMDTGEALKFSLSESGRRLGLVPCGAVGVQLSEIQDQKWTVKPHIGEVFCYLPL----RIKTGLPVHINGCFAVTSNRKEI-WKT--------DTKGRWNTTFMRHVIVKAYLQVLSVLRDLATSGELMDYTYYAVWPDPDLVHDDFSVICQGFYEDIAHGKGKELTKV-FSDGSTWVSMKNVRFL 1994          
The following BLAST results are available for this feature:
BLAST of TCONS_00055962-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SACS2.362e-7734.00Sacsin OS=Homo sapiens GN=SACS PE=1 SV=2[more]
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