TCONS_00055984-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055984-protein
Unique NameTCONS_00055984-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length470

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055984-protein ID=TCONS_00055984-protein|Name=TCONS_00055984-protein|organism=Clytia hemisphaerica|type=polypeptide|length=470bp
MLACRCLQRPNIIRNLQRSVNIYKREVASASILSRCTNKEQTERTLSKNL
TFRSSNTLKHPAKGFQTSAFSFDDEFQIVSTPPFAESITEGDVRWEKEVG
DSVGVDEVIGEIETDKTSLPIVSPAAGVIEEIFVEDGGRVEKNDQLFKLK
LGAGGETKTEEAAPPPPPPPPPPPPPKAEAPKADTAGPAPTQAPPTTPLT
QQQPMMTRSPTPAPPPPASQMTASIEEVKEAPTRIHGTRNETKVKMNRMR
QRIAQRLKEAQNINAMLTTFNEIDMSNAMKIRNQYKDLFLKKHNMKLGFM
SPFLKASSTALEQMPTVNAVIEDNYVIYRDFVDISVAVATPKGLVVPVLR
DVNKMNFADIERGMNALGEKARSGSLAIEDMDGGTFTISNGGVFGSLMGT
PIINPPQSAILGMHGIFDRPVAVNGKVEIRPMMYVALTYDHRLVDGREAV
TFLRKIKQNVEDPAAMFLDL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035236XLOC_035236Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055984TCONS_00055984Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000089Biotin_lipoyl
IPR0010782-oxoacid_DH_actylTfrase
IPR006255SucB
IPR0030162-oxoA_DH_lipoyl-BS
IPR011053Single_hybrid_motif
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0006099tricarboxylic acid cycle
Vocabulary: Molecular Function
TermDefinition
GO:0016746transferase activity, transferring acyl groups
GO:0004149dihydrolipoyllysine-residue succinyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0045252oxoglutarate dehydrogenase complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0006099 tricarboxylic acid cycle
cellular_component GO:0045252 oxoglutarate dehydrogenase complex
molecular_function GO:0004149 dihydrolipoyllysine-residue succinyltransferase activity
molecular_function GO:0016746 transferase activity, transferring acyl groups
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000089Biotin/lipoyl attachmentPFAMPF00364Biotin_lipoylcoord: 79..149
e-value: 9.4E-17
score: 60.5
IPR000089Biotin/lipoyl attachmentPROSITEPS50968BIOTINYL_LIPOYLcoord: 76..150
score: 22.472
IPR0010782-oxoacid dehydrogenase acyltransferase, catalytic domainPFAMPF001982-oxoacid_dhcoord: 240..468
e-value: 3.4E-76
score: 255.7
NoneNo IPR availableGENE3D2.40.50.100coord: 120..213
e-value: 1.4E-5
score: 24.4
NoneNo IPR availableGENE3D3.30.559.10coord: 223..468
e-value: 3.5E-91
score: 304.5
NoneNo IPR availableGENE3D3.90.1170.30coord: 61..119
e-value: 4.0E-8
score: 32.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..222
NoneNo IPR availableCDDcd06849lipoyl_domaincoord: 82..149
e-value: 1.81356E-19
score: 81.6819
NoneNo IPR availableSUPERFAMILY52777CoA-dependent acyltransferasescoord: 240..469
IPR006255Dihydrolipoamide succinyltransferaseTIGRFAMTIGR01347TIGR01347coord: 79..469
e-value: 1.4E-152
score: 506.5
IPR0030162-oxo acid dehydrogenase, lipoyl-binding sitePROSITEPS00189LIPOYLcoord: 100..129
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 78..169

Blast
[Close]
BLAST of TCONS_00055984-protein vs. Swiss-Prot (Human)
Match: ODO2 (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Homo sapiens GN=DLST PE=1 SV=4)

HSP 1 Score: 451.055 bits (1159), Expect = 2.951e-156
Identity = 248/408 (60.78%), Postives = 286/408 (70.10%), Query Frame = 0 
Query:   65 FQTSAFSFDDEFQIVSTPPFAESITEGDVRWEKEVGDSVGVDEVIGEIETDKTSLPIVSPAAGVIEEIFVEDGGRVEKNDQLFKLKLGAGGETKTEEAAPPPPPPPPPPPPPKAEAPKADTAGPAPTQAPPTTPLTQQQPMMTRSPTPAPPPPASQMTASIEEVKEAPTRIHGTRNETKVKMNRMRQRIAQRLKEAQNINAMLTTFNEIDMSNAMKIRNQYKDLFLKKHNMKLGFMSPFLKASSTALEQMPTVNAVIEDNY--VIYRDFVDISVAVATPKGLVVPVLRDVNKMNFADIERGMNALGEKARSGSLAIEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGMHGIFDRPVAVNGKVEIRPMMYVALTYDHRLVDGREAVTFLRKIKQNVEDPAAMFLDL 470
            F+T+A   DD    V TP FAES+TEGDVRWEK VGD+V  DEV+ EIETDKTS+ + SPA GVIE + V DGG+VE    LF L+       K + A  P    P   P   A  P A          P  +     +P+    PT APP                P    G R+E + KMNRMRQRIAQRLKEAQN  AMLTTFNEIDMSN  ++R ++K+ FLKKHN+KLGFMS F+KAS+ AL++ P VNAVI+D    V+YRD++DISVAVATP+GLVVPV+R+V  MNFADIER +  LGEKAR   LAIEDMDGGTFTISNGGVFGSL GTPIINPPQSAILGMHGIFDRPVA+ GKVE+RPMMYVALTYDHRL+DGREAVTFLRKIK  VEDP  + LDL
Sbjct:   60 FRTTAVCKDD-LVTVKTPAFAESVTEGDVRWEKAVGDTVAEDEVVCEIETDKTSVQVPSPANGVIEALLVPDGGKVEGGTPLFTLRKTGAAPAKAKPAEAPAAAAPKAEPTAAAVPPPAAPIPTQMPPVPSPSQPPSGKPVSAVKPTVAPPLAE-------------PGAGKGLRSEHREKMNRMRQRIAQRLKEAQNTCAMLTTFNEIDMSNIQEMRARHKEAFLKKHNLKLGFMSAFVKASAFALQEQPVVNAVIDDTTKEVVYRDYIDISVAVATPRGLVVPVIRNVEAMNFADIERTITELGEKARKNELAIEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHGIFDRPVAIGGKVEVRPMMYVALTYDHRLIDGREAVTFLRKIKAAVEDPRVLLLDL 453
The following BLAST results are available for this feature:
BLAST of TCONS_00055984-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ODO22.951e-15660.78Dihydrolipoyllysine-residue succinyltransferase co... [more]
back to top