TCONS_00055991-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055991-protein
Unique NameTCONS_00055991-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length659

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055991-protein ID=TCONS_00055991-protein|Name=TCONS_00055991-protein|organism=Clytia hemisphaerica|type=polypeptide|length=659bp
NICLGPCVRPRVKRVFSLWSFYKQARSKMATTLREKQIESLKRMLNLNEP
LTSATLNVEPVWKVLVYDRFGQDIISPLLTVKELRELGVTLHLLVHSDRD
AIPDVPVVYFVFPTEENIQRICRDMKNGLYEKYYLNFISPISRHLLEDLA
SSSLQYDCVDVVTKVMDQYLNFISLENDFFTVKHHDRDSISYYALNKADA
RDSEIENICDTMVNSLFSFLVTLGSVPIIRCPKGNAAEMVAETLDKKLRE
NLRDSRNSLFTSDIQSGNFSFHRPVLIILDRNNDLCTPLHHTWTYQALCH
DVFDLQLNRVTVDEPSSSEQSFGDARPRKQVKKYDLSVKDKFWQQHRISP
FPTVAESIQKELDDYRSSEEEVKKLKSMMGVQNEEDEVVEAMWSENTNKL
TSAVSSLPELLEKKRVIDMHMNIATAMLEHIKQRKLDVLFECEEKIMSKS
TLETTVLEIINDPEVGSPEDKLRLFLIYYISTPNVSQAELDQHVEALTNV
GCDVSCISYMKKWKAFNKVASGPIQTGSGQSTYSAMFNRIMSTGSKFVME
GVKSLVVGTKNLPVTRIVDHIMEQKNSPEIDDYRYFDPKMLKQNENAQQK
KTFQEAIVFVVGGGNYIEYANLLSYVKRQTNTPKSITYGCSELLSASQFM
KQLQTLGQE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035240XLOC_035240Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055991TCONS_00055991Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001619Sec1-like
Vocabulary: Biological Process
TermDefinition
GO:0006904vesicle docking involved in exocytosis
GO:0016192vesicle-mediated transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006904 vesicle docking involved in exocytosis
biological_process GO:0016192 vesicle-mediated transport
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 355..378
NoneNo IPR availableGENE3D3.40.50.1910coord: 172..659
e-value: 5.5E-90
score: 302.4
NoneNo IPR availableGENE3D3.40.50.2060coord: 36..167
e-value: 2.4E-37
score: 127.1
IPR001619Sec1-like proteinPFAMPF00995Sec1coord: 63..652
e-value: 5.0E-127
score: 425.4
IPR001619Sec1-like proteinPIRSFPIRSF005715VPS45_Sec1coord: 30..659
e-value: 9.8E-67
score: 223.7
IPR001619Sec1-like proteinSUPERFAMILY56815Sec1/munc18-like (SM) proteinscoord: 29..659

Blast
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BLAST of TCONS_00055991-protein vs. Swiss-Prot (Human)
Match: SCFD1 (Sec1 family domain-containing protein 1 OS=Homo sapiens GN=SCFD1 PE=1 SV=4)

HSP 1 Score: 808.905 bits (2088), Expect = 0.000e+0
Identity = 393/633 (62.09%), Postives = 504/633 (79.62%), Query Frame = 0 
Query:   32 TLREKQIESLKRMLNLNEPLTSATLNVEPVWKVLVYDRFGQDIISPLLTVKELRELGVTLHLLVHSDRDAIPDVPVVYFVFPTEENIQRICRDMKNGLYEKYYLNFISPISRHLLEDLASSSLQYDCVDVVTKVMDQYLNFISLENDFFTVKHHDRDSISYYALNKADARDSEIENICDTMVNSLFSFLVTLGSVPIIRCPKGNAAEMVAETLDKKLRENLRDSRNSLFTSD-IQSGNFSFHRPVLIILDRNNDLCTPLHHTWTYQALCHDVFDLQLNRVTVDEPSSSEQSFGDARP-RKQVKKYDLSVKDKFWQQHRISPFPTVAESIQKELDDYRSSEEEVKKLKSMMGVQNEEDEVVEAMWSENTNKLTSAVSSLPELLEKKRVIDMHMNIATAMLEHIKQRKLDVLFECEEKIMSKSTLETTVLEIINDPEVGSPEDKLRLFLIYYISTPNV-SQAELDQHVEALTNVGCDVSCISYMKKWKAFNKVASGPIQTGSGQSTYSAMFNRIMSTGSKFVMEGVKSLVVGTKNLPVTRIVDHIMEQKNSPEIDDYRYFDPKMLKQNENA--QQKKTFQEAIVFVVGGGNYIEYANLLSYVKRQTNTPKSITYGCSELLSASQFMKQLQTLGQE 659
            ++RE+Q  +LKRMLN N P    +   EPVWKVL+YDRFGQDIISPLL+VKELR++G+TLHLL+HSDRD IPDVP VYFV PTEENI R+C+D++N LYE YYLNFIS ISR  LED+A+++L    V  V KV DQYLNFI+LE+D F + + +++ +SY A+N+ D  D+E+E + DT+V+SLF F VTLG+VPIIRC +G AAEMVA  LDKKLRENLRD+RNSLFT D + +G FSF RP+L+++DRN DL TPLHHTWTYQAL HDV D  LNRV ++E S  E S   ARP RK  K YDL+  DKFWQ+H+ SPFP VAES+Q+EL+ YR+ E+EVK+LKS+MG++  EDE   +M S+NT KLTSAVSSLPELLEKKR+ID+H N+ATA+LEHIK RKLDV FE EEKIMSK+TL+ ++L+II+DP+ G+PEDK+RLFLIYYIST    S+A+L+Q+ +ALT+ GC+++ + Y+K+WKAF K+AS P   GS  +    + +R+M+TGS+FVMEGVK+LV+  +NLPVTRI+D++ME K++PE DDYRYFDPKML+ N+++  + K  FQEAIVFVVGGGNYIEY NL+ Y+K +    K I YGCSEL +A+QF+KQL  LGQ+
Sbjct:   14 SIRERQTVALKRMLNFNVPHIKNSTG-EPVWKVLIYDRFGQDIISPLLSVKELRDMGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKLEDIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEMETVMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLGAGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGLEG-EDEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLLDIISDPDAGTPEDKMRLFLIYYISTQQAPSEADLEQYKKALTDAGCNLNPLQYIKQWKAFTKMASAPASYGSTTTKPMGLLSRVMNTGSQFVMEGVKNLVLKQQNLPVTRILDNLMEMKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGNYIEYQNLVDYIKGKQG--KHILYGCSELFNATQFIKQLSQLGQK 642
The following BLAST results are available for this feature:
BLAST of TCONS_00055991-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SCFD10.000e+062.09Sec1 family domain-containing protein 1 OS=Homo sa... [more]
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