TCONS_00055993-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055993-protein
Unique NameTCONS_00055993-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length387

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055993-protein ID=TCONS_00055993-protein|Name=TCONS_00055993-protein|organism=Clytia hemisphaerica|type=polypeptide|length=387bp
MSVLINDGNAENEDIVKCDIGELVLSVELLKNQVSPFIRIFNNTRSILRW
ERPLRTISVMLFLLYVVILNPLYIMLLVLTSILPMMVYGLVQCLGKAKRP
NKRYKDFFIKKGDDYYQDVLTQEERRKHLNMYLNMLVQTQKGCNELNKRF
HQFYSIIFWHEKTRSLKYFMMFTALVVLFYTSSMSHALFINILLLFLYNK
YLYKETMNTLYRMKASIMNLFTLKSHSKKKESASEHTTDVGLETIDSSER
SKEVEGGDSSASTSSESESDESETEDGNDMKISQSDAQKNMADNGSMMSK
FFSTRSWRKRTTEYCSSCYQTVSSLLKKRRYCRHCGKSFCSKCCHIRVPR
ALIGATAPAAYQEKVLVCQSCYKFLTNRSNSTTEIVE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035241XLOC_035241Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055993TCONS_00055993Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000306Znf_FYVE
IPR010482Peroxin
IPR013083Znf_RING/FYVE/PHD
IPR017455Znf_FYVE-rel
IPR011011Znf_FYVE_PHD
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 302..377
e-value: 0.0015
score: 18.4
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 307..375
e-value: 1.6E-8
score: 34.5
IPR010482Peroxin domainPFAMPF06398Pex24pcoord: 34..260
e-value: 5.0E-8
score: 32.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 313..381
e-value: 6.1E-11
score: 41.6
NoneNo IPR availableGENE3D2.40.155.10coord: 124..312
e-value: 0.22
score: 11.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..292
NoneNo IPR availableCDDcd15723FYVE_protrudincoord: 315..375
e-value: 2.78146E-23
score: 90.6354
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 309..376
score: 10.196
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 305..375

Blast
[Close]
BLAST of TCONS_00055993-protein vs. Swiss-Prot (Human)
Match: ZFY27 (Protrudin OS=Homo sapiens GN=ZFYVE27 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.094e-21
Identity = 99/389 (25.45%), Postives = 173/389 (44.47%), Query Frame = 0 
Query:   19 DIGELVLSVELLKNQVSPFIRIFNNTRSILRWERPLRTISVMLFL--LYVVILNPLYIMLLVLTSILPMMVYGLVQCLGKAKRPNKRY--KDFFIKKGDDYYQDVLTQEERRKHLNMYLNMLVQTQKGCNELNKRFHQFYSIIFWHEKTRSLKYFMMFTALVVLFYTSSMSHALFINILLLFLYNKYLYKETMNTLYRMKASIMNLFTLKSHSKKKESA--SEHTTDVGLET--IDSSERSKEVEGGDSSASTSSESESDESETEDG---------NDMKISQSDAQKNMA--DNGSMMSKFFSTRSWRKRTTEY------------CSSCYQTVSSLLKKRRYCRHCGKSFCSKCCHIRVPRALIGATAPAAYQEKVLVCQSCYKFLT 376
            D+  LVLS + L+  + P     +  R +LRW+ PL ++   L L  L++ +    +  +  L   +P ++ G +Q + +A+ P+     + +   + +D  +  L++ E    +  +L   +Q +   + L       Y ++ W     S +++      V + Y   +   L +    LFL N   ++     +   +AS+      + + K++E A  S    DVG +   +DS+      E     +   +E    + E +D           D + +   A+  +A  DNG  +SK    RS   R TE             C+ C  T S +LKKRR C +CG SFCS+CC  +VP++ +GATAP A +E V VC SC + L+
Sbjct:   36 DLFNLVLSYKRLEIYLEPLKDAGDGVRYLLRWQMPLCSLLTCLGLNVLFLTLNEGAWYSVGALMISVPALL-GYLQEVCRARLPDSELMRRKYHSVRQEDLQRGRLSRPEAVAEVKSFL---IQLEAFLSRLCCTCEAAYRVLHWENPVVSSQFYGALLGTVCMLYLLPLCWVLTLLNSTLFLGNVEFFR----VVSEYRASLQQ----RMNPKQEEHAFESPPPPDVGGKDGLMDSTPALTPTEDLTPGSVEEAEEAEPDEEFKDAIEETHLVVLEDDEGAPCPAEDELALQDNG-FLSKNEVLRSKVSRLTERLRKRYPTNNFGNCTGCSATFS-VLKKRRSCSNCGNSFCSRCCSFKVPKSSMGATAPEAQRETVFVCASCNQTLS 410
The following BLAST results are available for this feature:
BLAST of TCONS_00055993-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZFY273.094e-2125.45Protrudin OS=Homo sapiens GN=ZFYVE27 PE=1 SV=1[more]
back to top