TCONS_00055999-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055999-protein
Unique NameTCONS_00055999-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length654

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055999-protein ID=TCONS_00055999-protein|Name=TCONS_00055999-protein|organism=Clytia hemisphaerica|type=polypeptide|length=654bp
GEINIKMGISGLTSYINNLQQTMFKERIKLNSSCLVIDGFALFYALMKTA
RRREFGGDYDLLREHLNIFFSKLSKMDIQVYVVLDGGNNIDLKKATIEKR
KVQMIEKVTEFNRLGLGYRQIGDLPIPLLSMSLFREVMEIHENVKYIVCD
QEADLLVASLANQLDGYVVTNDSDFFLLDLKKGLITITSLCDSIKQSQPY
CTIYKQQNLSQYLGISPDLLPIIALVLGNDYSVDCYRLQLLSLMGIQPRD
KIDVKIEHIMKYLKGAVSVDRLLQTLCCGNEEMQSQLSKELEEYNVHQFD
GLSQEYIGYFETQQKETAARNFFDSKNKLKNFIDQLVRAGLIDACVLDLL
NYKTHFVNVQCELIAKRCTSVCSSVLRRYLYGMLLKQDEIVVEYTRSGQQ
YRPKMVRPSNDLPSLDELWSRSEEERQSFFLDLLDIPLEGRGAIISPAHQ
SSLFIITLQYFTQVHSTSEDQTNAFLEMHLILRNGNRCFDVPHLDQAMLH
VYSSFHTVFYYINLINTLLGEPFVTPKASQLMSGSVFQSLCQRGNKDFKA
DYAKEDLTDLETYQNFILPNMMDKVQPRSSSKKNNQHHHHYHHHRHHQGL
KNSQLSNDALPRKPASQSGSKKSTFPSTNKKPSAQASNKKPSNRFQLLSI
SDDE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035242XLOC_035242Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055999TCONS_00055999Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006085XPG_DNA_repair_N
IPR029060PIN_domain-like
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
molecular_function GO:0004518 nuclease activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006085XPG N-terminalSMARTSM00485xpgn3coord: 7..107
e-value: 0.003
score: 13.4
IPR006085XPG N-terminalPFAMPF00752XPG_Ncoord: 7..102
e-value: 1.4E-6
score: 28.6
NoneNo IPR availablePFAMPF12813XPG_I_2coord: 130..237
e-value: 2.2E-9
score: 37.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 575..654
IPR029060PIN domain-likeGENE3D3.40.50.1010coord: 7..215
e-value: 7.6E-20
score: 71.0
IPR029060PIN domain-likeSUPERFAMILY88723PIN domain-likecoord: 7..190

Blast
[Close]
BLAST of TCONS_00055999-protein vs. Swiss-Prot (Human)
Match: ASTE1 (Protein asteroid homolog 1 OS=Homo sapiens GN=ASTE1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.441e-23
Identity = 79/235 (33.62%), Postives = 124/235 (52.77%), Query Frame = 0 
Query:    7 MGISGLTSYINNLQQTMFKERIKLNSSCLVIDGFALFYALMKTARRR-EFGGDYDLLREHLNIFFSKLSKMDIQVYVVLDGGNNI-DLKKATIEKRKVQMIEKVTEFNRLGLGYRQIGDLPIPLLSMSLFREVMEIHENVKYIVCDQEADLLVASLANQLDGYVVTNDSDFFLLDLKKGLITITSL----CDSIKQSQPYCTIYKQQNLSQYL----GISPDLLPIIALVLGNDY 231
            MGI GL S++ +     F + +KL  + +VIDG+ALF+ L  ++     +GGDYD   + +  FF  L   +I  YVVLDGG +I D K  T++ R  + I+     +  G GY        PLL   +F +V+ I   V ++ C  EAD  + +LAN  +  V+++DSDF + DLK G   + S      ++IK +Q Y    K  +L  +      ++  LLP+ A++ GND+
Sbjct:    1 MGIRGLMSFVEDHSNEFFTD-LKLRDTKIVIDGYALFHRLCFSSNLDLRYGGDYDSFADVVQKFFESLFACNICPYVVLDGGCDISDKKLTTLKDRAREKIQMAHSLSVGGSGYV------CPLLIREVFIQVL-IKLRVCFVQCFSEADRDIMTLANHWNCPVLSSDSDFCIFDLKTGFCPLNSFQWRNMNTIKGTQNYIPA-KCFSLDAFCHHFSNMNKALLPLFAVLCGNDH 226
The following BLAST results are available for this feature:
BLAST of TCONS_00055999-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASTE12.441e-2333.62Protein asteroid homolog 1 OS=Homo sapiens GN=ASTE... [more]
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