Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00056047-protein ID=TCONS_00056047-protein|Name=TCONS_00056047-protein|organism=Clytia hemisphaerica|type=polypeptide|length=160bp MASTFTDIVAAKKLASIKKAYKLPDGGDSDELTLEEQRKLDRKVEKESEK RLKQKEKREEQYSDREREREKLRSRIRAKYDIGTEKEQEIGKKKNKKKGD LKEKDFYKYNKAMSETSSKKQEKSELESTRGESMKFSSNMENLADHQEGK GKDKTDCIIS Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term | Definition |
IPR008849 | Synaphin |
Vocabulary: Molecular Function
Term | Definition |
GO:0019905 | syntaxin binding |
Vocabulary: Biological Process
Term | Definition |
GO:0006836 | neurotransmitter transport |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0006836 |
neurotransmitter transport |
molecular_function |
GO:0019905 |
syntaxin binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 45..75 |
None | No IPR available | GENE3D | 1.20.5.580 | | coord: 34..82 e-value: 2.9E-4 score: 20.4 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 37..160 |
IPR008849 | Synaphin | PFAM | PF05835 | Synaphin | coord: 13..123 e-value: 4.8E-6 score: 26.8 |
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056047-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 ( Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match Name | E-value | Identity | Description | |
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