TCONS_00056047-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056047-protein
Unique NameTCONS_00056047-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length160

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056047-protein ID=TCONS_00056047-protein|Name=TCONS_00056047-protein|organism=Clytia hemisphaerica|type=polypeptide|length=160bp
MASTFTDIVAAKKLASIKKAYKLPDGGDSDELTLEEQRKLDRKVEKESEK
RLKQKEKREEQYSDREREREKLRSRIRAKYDIGTEKEQEIGKKKNKKKGD
LKEKDFYKYNKAMSETSSKKQEKSELESTRGESMKFSSNMENLADHQEGK
GKDKTDCIIS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035271XLOC_035271Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056047TCONS_00056047Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008849Synaphin
Vocabulary: Molecular Function
TermDefinition
GO:0019905syntaxin binding
Vocabulary: Biological Process
TermDefinition
GO:0006836neurotransmitter transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006836 neurotransmitter transport
molecular_function GO:0019905 syntaxin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
MASTFTDIVAAKKLASIKKAYKLPDGGDSDELTLEEQRKLDRKVEKESEKRLKQKEKREEQYSDREREREKLRSRIRAKYDIGTEKEQEIGKKKNKKKGDLKEKDFYKYNKAMSETSSKKQEKSELESTRGESMKFSSNMENLADHQEGKGKDKTDCIIS20406080100120140160Score = Expect = 2.9E-4 / Score = 20.4Score = Expect = 4.8E-6 / Score = 26.8SequenceCoilG3DSA:1.20.5.580mobidb-litePF05835
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 45..75
NoneNo IPR availableGENE3D1.20.5.580coord: 34..82
e-value: 2.9E-4
score: 20.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..160
IPR008849SynaphinPFAMPF05835Synaphincoord: 13..123
e-value: 4.8E-6
score: 26.8

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056047-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
MASTFTDIVAAKKLASIKKAYKLPDGGDSDELTLEEQRKLDRKVEKESEKRLKQKEKREEQYSDREREREKLRSRIRAKYDIGTEKEQEIGKKKNKKKGDLKEKDFYKYNKAMSETSSKKQEKSELESTRGESMKFSSNMENLADHQEGKGKDKTDCIIS20406080100120140160Sequence
Match NameE-valueIdentityDescription
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