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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00056155-protein ID=TCONS_00056155-protein|Name=TCONS_00056155-protein|organism=Clytia hemisphaerica|type=polypeptide|length=742bp
FIIIFLFEMGLKKKLKTTFTRKTNSRKEKRKEAKKRSRTLQGSNVSLSIA
DVYDQLYEEHETGKQTPVPLSETRLPGSRPNDKFQDIETSELQIIPSHNA
EVAQKRPRTARVLTCPGNLPAPTRTQTRMRFRDDDDDGIDMISSCSSASE
ISIKSFHSDSTISPHVTIVAPFTPRFSRMGHGGFDGPIMPRADIFLPPKM
ENDISLEDLDSYSHDGDVEPHIPKCRAPPQEDLYFMYKKLLTDPFRNTKP
VIDLRPTTSSLSLISSDTVFDWPVRERFEVPYVEPTKLPPIGYGFHHANT
RQENMVGRLNRFQTDRESLRNQPLKFPSIIQMNNLNAQLRTMSRSSTACS
GSINDSYSRSSSRSSYSSARSKGQTAQSYINNIKENQCTWTKNEQINLKG
EKRIRRKLLDGAYPNSTVKEDKLPTLLRFVWKGKHKKLKNYLNDASKHKK
INRTDKFGRTALHFAASWADYRMLKILLDVRGIDVNIKDQHHKTPLFKAI
DMKSLACVRLLVHAGAKARVTCSDERNALEYALTEYGDDAFEIIDFFYNG
RGIRDIDMGSNGMSLLHQAVVTKKHVTNVKVIKMILEPGLVDVNAVEGDK
RTPLILAAQSKRPDLLLALLENGADPKHYDSFMKNAICYTEKDSTCYKIL
QGFKVNKKTGKRIFKYRPDGQLATVQAINVKAKDNNQRGSTPPKQKGQKD
APYNINPKMDDPEYRAHITSLFTASKFKEPKREDLYYDPLSI Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK_2a | coord: 491..522
e-value: 3.8
score: 16.5
coord: 457..487
e-value: 0.0034
score: 26.6
coord: 599..628
e-value: 0.024
score: 23.8
coord: 561..595
e-value: 17.0
score: 14.4 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 457..490
score: 9.404 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 599..631
score: 10.179 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 544..688
e-value: 2.1E-13
score: 49.4 |
| IPR020683 | Ankyrin repeat-containing domain | PFAM | PF12796 | Ank_2 | coord: 440..519
e-value: 2.0E-9
score: 37.8
coord: 540..628
e-value: 2.1E-6
score: 28.1 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 10..543
e-value: 1.7E-24
score: 85.6 |
| IPR020683 | Ankyrin repeat-containing domain | PROSITE | PS50297 | ANK_REP_REGION | coord: 451..631
score: 25.01 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 426..640 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 347..373 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 60..80 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 683..710 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 21..41 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 452..620
e-value: 1.94262E-20
score: 87.439 |
Blast
The following BLAST results are available for this feature:
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