TCONS_00056304-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00056304-protein
Unique Name	TCONS_00056304-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	403

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00056304-protein ID=TCONS_00056304-protein|Name=TCONS_00056304-protein|organism=Clytia hemisphaerica|type=polypeptide|length=403bp
MKESITQGLKSLQYDKLGSLKVKEMLKSADLDSDFIQLVCWLVDKLKSLV
DVDIANISGEADTFCLELIGILRDLACPYASIIGGKGLQTEKGKMFTLDY
LISELQAARMCSSMNDDDSKMDVDSGSAVSIPIANIMQTLNVPMSSNNNV
NTLFNDINQKLQERLKTLPVDHLQEPLLKKSLSEEQWSKVSQINDAMCQD
YKQRREVLIKRVDVTVQSFCWSEKLKSTPEQVATAFQPIRQQLHADSITS
TADILATRTDLYPVEKTSSGASREATKCDLNKIIIPKVPDRGGRPSKQAP
PPEMPKFMKRVADPPRGGGGGGGRGRGGYRGRGGSSDRGGGGGGGGGGGG
NDSQGGGGGARGGGRGGYNRGGKSNWRGKQGGRGGGRDYESRPSSGDSKM
YYS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_035469	XLOC_035469	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00056304	TCONS_00056304	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018797	Uncharacterised_FAM98

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018797	Uncharacterised protein family FAM98	PFAM	PF10239	DUF2465	coord: 8..311 e-value: 9.0E-88 score: 294.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 282..403

Blast

[Close]

BLAST of TCONS_00056304-protein vs. Swiss-Prot (Human)
Match: FA98A (Protein FAM98A OS=Homo sapiens GN=FAM98A PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 7.327e-55
Identity = 109/270 (40.37%), Postives = 158/270 (58.52%), Query Frame = 0

Query:   34 DFIQLVCWLVDKLKSLV----DVDIANISGEADTFCLELIGILRDLACPYASIIGG---KGLQTEKGKMFTLDYLISELQAARMCSSMNDDDSKMDVDSGSAVSIPIANIMQTLNVPMS-SNNNVNTLFNDINQK-LQERLKTLPVDHLQEPLLKKSLSEEQWSKVSQINDAMCQDYKQRREVLIKRVDVTVQSFCWSEKLKSTPEQVATAFQPIRQQLHADSITSTADILATRTDLYPVEKTSSGASREATKCDLNKIIIPKVPDRGGR 294
            +F +L  WLV +L+ L     +V   N   EA+ F LE+ G+L ++ CPY S+  G   K L  +K  +  L YLISEL+AARM   +N    K     GS V   +  I   L +    +N  +   F+ I +K L+E L  +P +H+ +PLLKK +    W K+  IN A+  +Y+ RR++LIKR+DVTVQSF WS++ KS  E++A  +QP R  L   +  S A +LA R DL  + +TSSG+ RE T C +NK+++ +VPDRGGR
Sbjct:   41 EFTKLCAWLVSELRVLCKLEENVQATNSPSEAEEFQLEVSGLLGEMNCPYLSLTSGDVTKRLLIQKNCLLLLTYLISELEAARMLC-VNAPPKKAQEGGGSEVFQELKGICIALGMSKPPANITMFQFFSGIEKKKLKETLAKVPPNHVGKPLLKKPMGPAHWEKIEAINQAIANEYEVRRKLLIKRLDVTVQSFGWSDRAKSQTEKLAKVYQPKRSVLSPKTTISVAHLLAARQDLSKILRTSSGSIREKTACAINKVLMGRVPDRGGR 309

The following BLAST results are available for this feature:

BLAST of TCONS_00056304-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00056304-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FA98A	7.327e-55	40.37	Protein FAM98A OS=Homo sapiens GN=FAM98A PE=1 SV=1	[more]

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TCONS_00056304-protein (polypeptide) - C. hemisphaerica