TCONS_00056314-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056314-protein
Unique NameTCONS_00056314-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length126

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056314-protein ID=TCONS_00056314-protein|Name=TCONS_00056314-protein|organism=Clytia hemisphaerica|type=polypeptide|length=126bp
MEDANYNEYEEEETMENSSFAVLTTSICLTSDETNDTPDKQDAPSERPPV
KKDPDRPRYTLKEMQSLLEERNTYKIKMMALEEELELYKDGGPNFLKATQ
SAPANVNDPQKKNSGVRTFMQKFLGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035477XLOC_035477Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056314TCONS_00056314Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021563RILP_dimer
IPR034744RH2
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
MEDANYNEYEEEETMENSSFAVLTTSICLTSDETNDTPDKQDAPSERPPVKKDPDRPRYTLKEMQSLLEERNTYKIKMMALEEELELYKDGGPNFLKATQSAPANVNDPQKKNSGVRTFMQKFLGK102030405060708090100110120Score = Score = Score = Score = Expect = 3.6E-8 / Score = 33.4Score = 12.638SequenceCoilmobidb-litemobidb-liteSSF161256PF11461PS51777
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableSUPERFAMILY161256RILP dimerisation regioncoord: 60..94
IPR021563Rab interacting lysosomal protein, dimerization domainPFAMPF11461RILPcoord: 60..94
e-value: 3.6E-8
score: 33.4
IPR034744RH2 domainPROSITEPS51777RH2coord: 56..121
score: 12.638

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056314-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
MEDANYNEYEEEETMENSSFAVLTTSICLTSDETNDTPDKQDAPSERPPVKKDPDRPRYTLKEMQSLLEERNTYKIKMMALEEELELYKDGGPNFLKATQSAPANVNDPQKKNSGVRTFMQKFLGK102030405060708090100110120Sequence
Match NameE-valueIdentityDescription
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