TCONS_00056352-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056352-protein
Unique NameTCONS_00056352-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length123

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056352-protein ID=TCONS_00056352-protein|Name=TCONS_00056352-protein|organism=Clytia hemisphaerica|type=polypeptide|length=123bp
DNNCRYDHSKANVTISGYEDIPFADETEQVAALNDHGPISVCVDAGHLSF
QLYSSGVFYDPNCDPFSINHAVIAVGFGSEGGSDYWIIKNSWGTGWGDDG
YMKVSRNRNNHCGIATQSCYPII
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035504XLOC_035504Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056352TCONS_00056352Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000668Peptidase_C1A_C
IPR025661Pept_asp_AS
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0008234cysteine-type peptidase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0008234 cysteine-type peptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000668Peptidase C1A, papain C-terminalSMARTSM00645pept_c1coord: 1..122
e-value: 2.0E-8
score: 23.5
IPR000668Peptidase C1A, papain C-terminalPFAMPF00112Peptidase_C1coord: 2..122
e-value: 5.0E-39
score: 134.6
NoneNo IPR availableGENE3D2.40.50.170coord: 72..123
e-value: 1.3E-27
score: 95.2
NoneNo IPR availableGENE3D3.90.70.10coord: 1..71
e-value: 7.4E-17
score: 61.4
NoneNo IPR availableCDDcd02248Peptidase_C1Acoord: 1..121
e-value: 1.15948E-53
score: 168.571
NoneNo IPR availableSUPERFAMILY54001Cysteine proteinasescoord: 1..122
IPR025661Cysteine peptidase, asparagine active sitePROSITEPS00640THIOL_PROTEASE_ASNcoord: 85..104

Blast
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BLAST of TCONS_00056352-protein vs. Swiss-Prot (Human)
Match: CATS (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 8.659e-36
Identity = 56/123 (45.53%), Postives = 82/123 (66.67%), Query Frame = 0 
Query:    1 DNNCRYDHSKANVTISGYEDIPFADETEQVAALNDHGPISVCVDAGHLSFQLYSSGVFYDPNCDPFSINHAVIAVGFGSEGGSDYWIIKNSWGTGWGDDGYMKVSRNRNNHCGIATQSCYPII 123
            D  C+YD      T S Y ++P+  E     A+ + GP+SV VDA H SF LY SGV+Y+P+C   ++NH V+ VG+G   G +YW++KNSWG  +G++GY++++RN+ NHCGIA+   YP I
Sbjct:  210 DQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQ-NVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI 331
The following BLAST results are available for this feature:
BLAST of TCONS_00056352-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CATS8.659e-3645.53Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
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