TCONS_00056358-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056358-protein
Unique NameTCONS_00056358-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length558

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056358-protein ID=TCONS_00056358-protein|Name=TCONS_00056358-protein|organism=Clytia hemisphaerica|type=polypeptide|length=558bp
MGPTMIPLLKEKVDELFLHWFSEVETQQNLRKELSNILGTHDEIVPISTP
FLTSSPHGGQTTLISRPSSPPIPPGSPTTPRSPRRRTGSDLSRKGSRKNP
RRRTQEEQKPALYPGCAEKLKPFYFPFGEPRTLENEGNTVNSITTYFDRL
KNQTATMDDFPQLMKICGAPLYWKYPYFLACGGNKSNTITCKKFIATWKH
VNTKYHDEASRFFHLLSKDSQKHLTYDDFEGLLQDIINTHPGLKFLLDAP
EFHSRYIITVVARIFYTINRSWNGKLSLTELRRSNFLTVLKTLEEEEDIN
QVVDFFSYEHFYVIYCKFWELDTDHDMVISKDDLSRYSNGAVSLRMIDRL
FSGCVTRDQSLKEGKMLYVDFIWFILSEVDKASPTGMEYWFRCMDMDGDG
VISMYELQYFYEDQLQKMIELGMETLSFQDCLCQMLDLVKPSHPYQVTLR
DLKKCKLAPVFFDTFFNLEKWLEHEQKDPFQASRNENGEPEVSAWERYVG
EEYELLVAEEGASQINQEIDYEDDFDDEEMLTYEESLAKHSSLDPSLSNG
WSALNAVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035507XLOC_035507Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056358TCONS_00056358Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 272..326
e-value: 0.035
score: 13.5
NoneNo IPR availableGENE3D1.10.238.10coord: 398..538
e-value: 0.0021
score: 17.5
NoneNo IPR availableGENE3D1.10.238.10coord: 327..397
e-value: 4.4E-10
score: 38.9
NoneNo IPR availableGENE3D1.10.238.10coord: 91..271
e-value: 1.0E-5
score: 24.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 539..558
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 311..412
e-value: 1.6E-19
score: 70.0
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 320..344
score: 5.447
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 204..239
score: 6.424
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 382..417
score: 10.803
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 395..407
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 147..283
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 295..457

Blast
[Close]
BLAST of TCONS_00056358-protein vs. Swiss-Prot (Human)
Match: P2R3B (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta OS=Homo sapiens GN=PPP2R3B PE=1 SV=2)

HSP 1 Score: 516.153 bits (1328), Expect = 8.244e-179
Identity = 258/541 (47.69%), Postives = 354/541 (65.43%), Query Frame = 0 
Query:    2 GPTMIPLLKEKVDELFLHWFSEVETQQNLRKELSNILGTHDEIVPISTPFLTSSPHGGQTTLIS--RPSSPPIPP----------GSPTTPRSPRRRTGSDLSRKGSRKNPRRRTQEEQKPALYPGCAEKLKPFYFPFGEPRTLENEGNTVNSITTYFDRLKNQTATMDDFPQLMKICGAPLYWKYPYFLACGGNKSNTITCKKFIATWKHVNTKYHDEASRFFHLLSKDSQKHLTYDDFEGLLQDIINTHPGLKFLLDAPEFHSRYIITVVARIFYTINRSWNGKLSLTELRRSNFLTVLKTLEEEEDINQVVDFFSYEHFYVIYCKFWELDTDHDMVISKDDLSRYSNGAVSLRMIDRLFSGCVTRDQSL-KEGKMLYVDFIWFILSEVDKASPTGMEYWFRCMDMDGDGVISMYELQYFYEDQLQKMIELGMETLSFQDCLCQMLDLVKPSHPYQVTLRDLKKCKLAPVFFDTFFNLEKWLEHEQKDPFQASRN-ENGEPEVSAWERYVGEEYELLVAEEGASQINQEIDYEDDFDDE 528
            G  + P+LK KVDELFL+W SE  TQ+ L+  L  I     +     TP     P    T  ++  RPS    P           G+ ++PR+     G+       R    R  Q  ++  L P  ++ +  FYFP G P+   N    ++ I + F R  ++ ATMDD   + K CG PLYWK P F   GG ++ +++  KF+A W+ +    HD+A++F HLL      +L  +DF   LQD++NTHPGL FL +A EFHSRYI TV+ RIFY +NRSW+G+++  ELRRS+FL  +  LEEE DINQ+ +FFSYEHFYVIYCKFWELDTDHD++I  DDL+R+++ A+S +MIDR+FSG VTR + + KEGK+ Y DF+WF++SE DK +PT +EYWFRCMD+DGDG +SM+EL+YFYE+Q +++  + +E L FQDCLCQMLDLVKP    ++TL+DLK+CKLA VFFDTFFN+EK+L+HEQK+     R+ ++G PE+S WE+Y  EEY++LVAEE A +      +ED F+ E
Sbjct:    4 GKVLQPVLKMKVDELFLYWLSEASTQRMLQDCLRRIKAPGRDQ---PTPGDGEQPGAWPTAPLAAPRPSGLEPPGTPGPGPALPLGAASSPRNAPHVRGT------RRSAGTRVVQTRKEEPLPPATSQSIPTFYFPRGRPQDSVNVDAVISKIESTFARFPHERATMDDMGLVAKACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQNVALLEEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETAGE-----PWEDGFEAE 530
The following BLAST results are available for this feature:
BLAST of TCONS_00056358-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
P2R3B8.244e-17947.69Serine/threonine-protein phosphatase 2A regulatory... [more]
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