Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00056498-protein ID=TCONS_00056498-protein|Name=TCONS_00056498-protein|organism=Clytia hemisphaerica|type=polypeptide|length=525bp MVDKYNHNLEFLEYNDERHHQHNKDPVLEQLPEELNIKSTRKDHGLYLNT SEKEEHYPSERENHVEFHPRRYTEEDIRYSEHDLANKNHPYRKENYEEHI SISAFVGLQKESLTKDNHAKIFEDDQSNKINGYSFKDEHSANCLSGLEHN SKLNLSLNNNNSADKSHDQPIENNLDSAVHTPLEFPTITNGPRPKKAAPK KRYTRTRYSNEELQVALSKCREGLSIRECSKKYGIPKSTLWDKLSCRTPA TVLRPGRSFKVSDAVENRLVNWILKMNEDGFKVQEKQIIEAVKLFHDKSE GVNANDNSHSKPGKAWYKNFLKRYPAAQHNLSVNHQKAEYSIEMLQAWYD ETVDTEVPVLVESVESVQPKQPEPTTPNQIRSVLDHIEQTIGEEKLNYYR QWKENGELSKKDPLYTAWYALAMDLDRIHNSNKNKRKRKSEQPRVNGNYV HQHHHLENSKVEHHPLENDLIDLNSTTTTAPNVEFTENKDNRTVENNLPQ SHYNGAYVSNESESVPPDDQLLKTC Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term | Definition |
GO:0003677 | DNA binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
molecular_function |
GO:0003677 |
DNA binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR011991 | Winged helix-turn-helix DNA-binding domain | GENE3D | 1.10.10.10 | | coord: 199..413 e-value: 8.6E-7 score: 28.3 |
IPR006600 | HTH CenpB-type DNA-binding domain | PFAM | PF03221 | HTH_Tnp_Tc5 | coord: 264..325 e-value: 5.0E-7 score: 29.6 |
IPR006600 | HTH CenpB-type DNA-binding domain | PROSITE | PS51253 | HTH_CENPB | coord: 253..330 score: 9.9 |
IPR007889 | DNA binding HTH domain, Psq-type | PFAM | PF05225 | HTH_psq | coord: 209..243 e-value: 1.3E-8 score: 34.4 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 480..525 |
IPR009057 | Homeobox domain-like | SUPERFAMILY | 46689 | Homeodomain-like | coord: 205..255 |
Blast
The following BLAST results are available for this feature:
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