TCONS_00056512-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056512-protein
Unique NameTCONS_00056512-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length471

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056512-protein ID=TCONS_00056512-protein|Name=TCONS_00056512-protein|organism=Clytia hemisphaerica|type=polypeptide|length=471bp
SFPAPPTIPTTPTSSSTHDSDSVEDIKVHMQLLQKSAASQFSKANKEFSK
QCTNKLDQFVKDVGSVANEKEERTTQILSNIVNNTIAMKLEKTIRTEMKQ
TVLAGMEKMTAKYFESLNNQVAQKISLWERTLREECAELVKSKPVAESIG
YAAASILEGTIPNAYRESFQSILLPGFEKASMNMFMQINRTFQQGTKQYL
ERLDKHMESKNSNQEDTQENILTNLHDLVQSFQGTADRLTTGVETNLEAL
MQKQLRDATDRMQTTFGKTIESKIIPSLSRTISQSAQDSFKEFKQTIDSS
INSMLSSAAVAAANSSNETFNVHKTIEEKKTYIDRLFEEGDYNTAFETAL
SASDLQIVLFACGKIDPYDLFNPSSGGNTSLTQPIILSLIQQLSQNLTED
TDIKTKYLEESLICIDCNEEVTRTHLPSILQTLNEQLAKTIDALSKESPP
NKKQIRSLKKVQMASNGLFMS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035597XLOC_035597Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056512TCONS_00056512Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300350400450SequenceCoilG3DSA:1.10.220.100mobidb-lite
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 200..220
NoneNo IPR availableGENE3D1.10.220.100coord: 381..466
e-value: 4.5E-17
score: 61.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056512-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
SFPAPPTIPTTPTSSSTHDSDSVEDIKVHMQLLQKSAASQFSKANKEFSKQCTNKLDQFVKDVGSVANEKEERTTQILSNIVNNTIAMKLEKTIRTEMKQTVLAGMEKMTAKYFESLNNQVAQKISLWERTLREECAELVKSKPVAESIGYAAASILEGTIPNAYRESFQSILLPGFEKASMNMFMQINRTFQQGTKQYLERLDKHMESKNSNQEDTQENILTNLHDLVQSFQGTADRLTTGVETNLEALMQKQLRDATDRMQTTFGKTIESKIIPSLSRTISQSAQDSFKEFKQTIDSSINSMLSSAAVAAANSSNETFNVHKTIEEKKTYIDRLFEEGDYNTAFETALSASDLQIVLFACGKIDPYDLFNPSSGGNTSLTQPIILSLIQQLSQNLTEDTDIKTKYLEESLICIDCNEEVTRTHLPSILQTLNEQLAKTIDALSKESPPNKKQIRSLKKVQMASNGLFMS50100150200250300350400450Expect = 1.14e-62 / Id = 32.87SequenceEDC4
Match NameE-valueIdentityDescription
EDC41.137e-6232.87Enhancer of mRNA-decapping protein 4 OS=Homo sapie... [more]
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