TCONS_00056517-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056517-protein
Unique NameTCONS_00056517-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length225

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056517-protein ID=TCONS_00056517-protein|Name=TCONS_00056517-protein|organism=Clytia hemisphaerica|type=polypeptide|length=225bp
MSWKGNATYQKQETKGGIYKVCLAGRMESGKTTIFQIISGNPINENPSND
FFEYQYDGLGKIVLNDTAGREHFTSMTIGTYYRGVHVIVFVYDATDQESL
NYIGGELEELKNRSEFENVQMILIRNKCDEPPSRIAVTEGDEETFVANRS
NLLGDRLKLRRKVSAKCDPEPIKKLFFEHLHDVIKGKGTTPDNEQFIKLR
EKRSASTKSTTNSSEKDDKCPCCIQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035600XLOC_035600Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056517TCONS_00056517Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 19..186
e-value: 6.1E-5
score: -48.1
NoneNo IPR availableGENE3D3.40.50.300coord: 11..223
e-value: 2.2E-23
score: 82.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..225
NoneNo IPR availablePROSITEPS51419RABcoord: 1..223
score: 12.639
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 61..134
e-value: 6.3E-13
score: 48.5
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 18..136
e-value: 7.8E-12
score: 43.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..145

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056517-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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