TCONS_00056527-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056527-protein
Unique NameTCONS_00056527-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length486

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056527-protein ID=TCONS_00056527-protein|Name=TCONS_00056527-protein|organism=Clytia hemisphaerica|type=polypeptide|length=486bp
MRGDNLEDQIHSLRRLIERQSLRLEEKLTSLEDEVKEIKNRSPSGGGQAN
QGFIGDGYQQKGDINMEYLTDLEAKKASTEEDSVIESHKDFAEGLTIHGL
SRIAAGGTAAKVLWTILVIASFIIAVLISKEHWSAFLEHDSRTSTKIVSQ
SKVPIPAITICDHTAIANERRRFSGEPPPVKRPTLVDFSIVDCARNLTAC
GYNGTTFVRVQNISANYARASPQNHLVKFDETTDCFTITGEVLEMPSDVL
SYQAAADRRLSSNEWTELYVNSVDETFFESSEAVYWASEGFYYVNIEKKI
ITRLGLPFTECVDGSGPYSLNKFKGNYSVMKCQKGCFWEAVFEKCGQIPA
MYKKHMRHPEKFANKTFVDDETGQACLSILENDHALTEKCDNLCELDPCY
DEDIKLSLFHNPMKLDHFLELAFTFQSFLLEIVAEKPQYTWQDLFANFGG
CLGLMTGSSILSIIELIIFFGLFFTNFLRSKKKNNS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035607XLOC_035607Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056527TCONS_00056527Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001873ENaC
Vocabulary: Biological Process
TermDefinition
GO:0006814sodium ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005272sodium channel activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006814 sodium ion transport
cellular_component GO:0016020 membrane
molecular_function GO:0005272 sodium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300350400450Expect = 1.6E-4 / Score = 21.4Expect = 5.4E-21 / Score = 75.0SequenceCoilG3DSA:1.10.287.770G3DSA:1.10.287.820G3DSA:1.10.287.770PF00858
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 14..41
NoneNo IPR availableGENE3D1.10.287.770coord: 96..273
e-value: 1.6E-4
score: 21.4
NoneNo IPR availableGENE3D1.10.287.820coord: 303..397
e-value: 3.7E-5
score: 23.8
NoneNo IPR availableGENE3D1.10.287.770coord: 413..477
e-value: 3.7E-12
score: 45.5
IPR001873Epithelial sodium channelPFAMPF00858ASCcoord: 261..469
e-value: 5.4E-21
score: 75.0
coord: 91..172
e-value: 1.7E-13
score: 50.2

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056527-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
50100150200250300350400450Sequence
Match NameE-valueIdentityDescription
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