TCONS_00056551-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056551-protein
Unique NameTCONS_00056551-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length183

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056551-protein ID=TCONS_00056551-protein|Name=TCONS_00056551-protein|organism=Clytia hemisphaerica|type=polypeptide|length=183bp
MVEILDISSWFGEVKRMNKRQLFYQILNFGMIVSSALMIWKGLMVVTGSE
SPIVVVLSGSMEPAFYRGDLLFLTNDNEKPIRAGEIVVFKIEGREIPIVH
RVIKVHEKENGYVKFLTKGDNNNVDDRGLYAPGQLWLEKKDVVGRANGFL
PYVGIVTILMNDYPKIKYLILAALGFFVLIHRE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035631XLOC_035631Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056551TCONS_00056551Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001733Peptidase_S26B
IPR015927Peptidase_S24_S26A/B/C
IPR019756Pept_S26A_signal_pept_1_Ser-AS
IPR019758Pept_S26A_signal_pept_1_CS
Vocabulary: Molecular Function
TermDefinition
GO:0008233peptidase activity
GO:0008236serine-type peptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006465signal peptide processing
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006465 signal peptide processing
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0008233 peptidase activity
molecular_function GO:0008236 serine-type peptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001733Peptidase S26BPRINTSPR00728SIGNALPTASEcoord: 56..71
score: 71.35
coord: 115..126
score: 66.67
IPR001733Peptidase S26BTIGRFAMTIGR02228TIGR02228coord: 30..174
e-value: 6.1E-31
score: 105.4
IPR015927Peptidase S24/S26A/S26B/S26CPFAMPF00717Peptidase_S24coord: 56..108
e-value: 2.1E-10
score: 40.3
IPR015927Peptidase S24/S26A/S26B/S26CSUPERFAMILY51306LexA/Signal peptidasecoord: 53..122
NoneNo IPR availableGENE3D2.10.109.10coord: 11..148
e-value: 1.3E-17
score: 63.1
NoneNo IPR availableCDDcd06530S26_SPase_Icoord: 52..146
e-value: 2.29913E-18
score: 74.9295
IPR019756Peptidase S26A, signal peptidase I, serine active sitePROSITEPS00501SPASE_I_1coord: 58..65
IPR019758Peptidase S26A, signal peptidase I, conserved sitePROSITEPS00761SPASE_I_3coord: 115..128

Blast
[Close]
BLAST of TCONS_00056551-protein vs. Swiss-Prot (Human)
Match: SC11C (Signal peptidase complex catalytic subunit SEC11C OS=Homo sapiens GN=SEC11C PE=1 SV=3)

HSP 1 Score: 293.123 bits (749), Expect = 1.283e-102
Identity = 140/173 (80.92%), Postives = 158/173 (91.33%), Query Frame = 0 
Query:   11 FGEVKRMNKRQLFYQILNFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFYRGDLLFLTNDNEKPIRAGEIVVFKIEGREIPIVHRVIKVHEKENGYVKFLTKGDNNNVDDRGLYAPGQLWLEKKDVVGRANGFLPYVGIVTILMNDYPKIKYLILAALGFFVLIHRE 183
            FG++K+MNKRQL+YQ+LNF MIVSSALMIWKGL+V+TGSESPIVVVLSGSMEPAF+RGDLLFLTN  E PIRAGEIVVFK+EGR+IPIVHRVIKVHEK+NG +KFLTKGDNN VDDRGLY  GQ WLEKKDVVGRA GFLPYVG+VTI+MNDYPK KY +LA +G +VL+ RE
Sbjct:   19 FGDLKKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEKDNGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYALLAVMGAYVLLKRE 191
The following BLAST results are available for this feature:
BLAST of TCONS_00056551-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SC11C1.283e-10280.92Signal peptidase complex catalytic subunit SEC11C ... [more]
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