TCONS_00056639-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056639-protein
Unique NameTCONS_00056639-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length309

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056639-protein ID=TCONS_00056639-protein|Name=TCONS_00056639-protein|organism=Clytia hemisphaerica|type=polypeptide|length=309bp
IIIPLAKSTRKSLKDPNNYRGISLIPILTKLMEQIILIKHPELTEHGPSQ
FGFTSRSSTTHAETVIYDTIRHYNNQGSPVYICSLDAEKAFDCCNWLKLF
QKLNSESILPKTVIRTLIQLYMNGDATVRYQNHKSAPFKLSQGVRQGSIL
SPHLYNFYTKDILENIKSLNAGTYLPNMDTSIIAFADDIILLSPTLRGLQ
MMINKCVQKGCEHLIKFNDKTQFVISGRSPIPNPTITVNNVNIHPKRTLT
HLGFEWINSITSNELTLKQHLTNRINKLKEKYKETPPLQHCDHLQDSNNT
STPLWPGNR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035673XLOC_035673Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056639TCONS_00056639Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300Expect = 3.6E-31 / Score = 108.3Score = 14.554Expect = 4.5E-22 / Score = 78.1Score = Expect = 4.08207E-37 / Score = 132.415Score = SequencePF00078PS50878G3DSA:3.30.70.270mobidb-litecd01650SSF56672
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 14..254
e-value: 3.6E-31
score: 108.3
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..256
score: 14.554
NoneNo IPR availableGENE3D3.30.70.270coord: 45..255
e-value: 4.5E-22
score: 78.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..309
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 1..254
e-value: 4.08207E-37
score: 132.415
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 11..226

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056639-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
50100150200250300Sequence
Match NameE-valueIdentityDescription
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