TCONS_00056740-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056740-protein
Unique NameTCONS_00056740-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length342

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056740-protein ID=TCONS_00056740-protein|Name=TCONS_00056740-protein|organism=Clytia hemisphaerica|type=polypeptide|length=342bp
MGNICCAETSTDSFKTNGKVKNNFDEDDPLQGSNQEPLELQHISEREYEL
SENKETLFLRRSEAESAARQAQEEKRRRRHTLYSPDRTSENSMKKTKLKK
SNSCSTIFIDDNTASQPNLKMMLKCVSLAIYYHVKNRDYEVHLLDIFDEK
LHPLSKDPVPENYGRINPEHKHIYRFLKTLFSAAQLTSECAIITLVYLER
LITYAELDLHPSNWKRIVLGAVLLASKVWDDQAVWNVDYCQILRDITVED
MNELERMFLELLQYNINVPSSVYAKYYFDLRALAERNNFQLQMQPLDPKR
ARKLEAISRFCDEKFTLPSRRLHRSNSVDDMRSKRRSIAVIS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035746XLOC_035746Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056740TCONS_00056740Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR006671Cyclin_N
IPR012399Cyclin_Y
Vocabulary: Molecular Function
TermDefinition
GO:0019901protein kinase binding
Vocabulary: Biological Process
TermDefinition
GO:0000079regulation of cyclin-dependent protein serine/threonine kinase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity
molecular_function GO:0019901 protein kinase binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 54..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..96
NoneNo IPR availableCDDcd00043CYCLINcoord: 171..259
e-value: 2.2632E-6
score: 43.7665
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 175..260
e-value: 4.2E-8
score: 42.9
IPR013763Cyclin-likeGENE3D1.10.472.10coord: 165..267
e-value: 6.9E-11
score: 41.6
IPR013763Cyclin-likeSUPERFAMILY47954Cyclin-likecoord: 149..267
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 160..267
e-value: 9.0E-14
score: 51.3
IPR012399Cyclin YPIRSFPIRSF028934Cyclin_CG14939coord: 2..342
e-value: 4.1E-128
score: 425.4

Blast
[Close]
BLAST of TCONS_00056740-protein vs. Swiss-Prot (Human)
Match: CCNY (Cyclin-Y OS=Homo sapiens GN=CCNY PE=1 SV=2)

HSP 1 Score: 358.992 bits (920), Expect = 8.680e-124
Identity = 198/359 (55.15%), Postives = 242/359 (67.41%), Query Frame = 0 
Query:    1 MGNIC-CAETSTDSFKTNGKVKNNFDEDDPLQGSNQEPLELQHISEREYELSENKE----------TLFLRRSEAESAARQAQEEKRRRRHTLY----SPDRTSENSMKKTKLKKSNSCSTIFIDDNTASQPNLKMMLKCVSLAIYYHVKNRDYEVH-LLDIFDEKLHPLSKDPVPENYGRINPEHKHIYRFLKTLFSAAQLTSECAIITLVYLERLITYAELDLHPSNWKRIVLGAVLLASKVWDDQAVWNVDYCQILRDITVEDMNELERMFLELLQYNINVPSSVYAKYYFDLRALAERNNFQLQMQPLDPKRARKLEAISRFCDEKFT-LPSRRLHRSNSVDDMRSKRRSIAVIS 342
            MGN   C  +S+   + N   +      D           LQHIS+RE     N E          T+FL +S         Q + R +R +L+     P + +         +K +SCSTIF+DD+T SQPNLK  +KCV+LAIYYH+KNRD +   LLDIFDE LHPLSK  VP +Y + NPE K IYRF++TLFSAAQLT+ECAI+TLVYLERL+TYAE+D+ P+NWKRIVLGA+LLASKVWDDQAVWNVDYCQIL+DITVEDMNELER FLELLQ+NINVPSSVYAKYYFDLR+LAE NN    ++PL  +RA KLEAISR C++K+  L      RS S D++   R S A+IS
Sbjct:    1 MGNTTSCCVSSSPKLRRNAHSRLESYRPDTDLSREDTGCNLQHISDRENIDDLNMEFNPSDHPRASTIFLSKS---------QTDVREKRKSLFINHHPPGQIA---------RKYSSCSTIFLDDSTVSQPNLKYTIKCVALAIYYHIKNRDPDGRMLLDIFDENLHPLSKSEVPPDYDKHNPEQKQIYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPANWKRIVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNELERQFLELLQFNINVPSSVYAKYYFDLRSLAEANNLSFPLEPLSRERAHKLEAISRLCEDKYKDLRRSARKRSASADNLTLPRWSPAIIS 341
The following BLAST results are available for this feature:
BLAST of TCONS_00056740-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCNY8.680e-12455.15Cyclin-Y OS=Homo sapiens GN=CCNY PE=1 SV=2[more]
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