TCONS_00056774-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00056774-protein
Unique Name	TCONS_00056774-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	351

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00056774-protein ID=TCONS_00056774-protein|Name=TCONS_00056774-protein|organism=Clytia hemisphaerica|type=polypeptide|length=351bp
MAFHQSNYFRAFVGIVLFFALFRLCAPLVFQYMIQYVRLIVSMASKDEER
VKRAEEISWEMEYQLHEMDMRYYQQKCKEDNRGKEPYAWLTAMLNDNYAI
GAIQLGHMLKKLSCYHKLIVLVSDGVTPGTREALRKVGFEVKLVEALDCN
WMDRQKGRKERNLGLPGTFMRFHAWNYTQYKKIMYLDSDVVPVVSVDELF
DLETDFNAAYCARPGIIDPCFNAGIILFKPSTKHYNGLMNLWGDLTKGTE
CPNDQVLLWHYYADHDMWNELPYAYNVRRYLYHPLKIYHFACCLTKKPWQ
VKNKPTRQDVAKFKGPFKEPWDMVILWWRYFYQALDEYKLNEWYNDVKNK
I

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_035759	XLOC_035759	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00056774	TCONS_00056774	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029044	Nucleotide-diphossugar_trans
IPR002495	Glyco_trans_8

Vocabulary: **Molecular Function**
Term	Definition
GO:0016757	transferase activity, transferring glycosyl groups

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029044	Nucleotide-diphospho-sugar transferases	GENE3D	3.90.550.10		coord: 83..349 e-value: 4.9E-41 score: 140.3
IPR029044	Nucleotide-diphospho-sugar transferases	SUPERFAMILY	53448	Nucleotide-diphospho-sugar transferases	coord: 86..332
IPR002495	Glycosyl transferase, family 8	PFAM	PF01501	Glyco_transf_8	coord: 93..300 e-value: 3.6E-10 score: 39.7

Blast

[Close]

BLAST of TCONS_00056774-protein vs. Swiss-Prot (Human)
Match: GLYG (Glycogenin-1 OS=Homo sapiens GN=GYG1 PE=1 SV=4)

HSP 1 Score: 114.005 bits (284), Expect = 7.939e-29
Identity = 83/259 (32.05%), Postives = 132/259 (50.97%), Query Frame = 0

Query:   88 AWLTAMLNDNYAIGAIQLGHMLKKLSCYHKLIVLVSDGVTPGTREALRKVGFEVKLVEALDCNWMDRQKGRKERNLGLPGTFMRFHAWNYTQYKKIMYLDSDVVPVVSVDELFDLETDFNAAYCARPGIIDPCFNAGIILFKPSTKHYNGLMNLWGDLTKGTECPNDQVLLWHYY---ADHDMWNELPYAYNVRR---YLYHP--------LKIYHFACCLTKKPWQVKNKPTRQDV-AKFKGPFKEPWDMVILWWRYF 331
            A++T   ND YA GA+ LG  LK+     +L+VL +  V+   R+ L  V  EV +V+ LD          K   LG+  T  + H W+ TQY K +++D+D + + ++D+LFD E + +AA    PG  D CFN+G+ +++PS + YN L++L  +  +G+    DQ +L  ++   A  D+   LP+ YN+     Y Y P         K+ HF   +  KPW     P  + V ++   P     + +ILWW  F
Sbjct:    5 AFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVDVLDSGDSAHLTLMKRPELGV--TLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDRE-ELSAA--PDPGWPD-CFNSGVFVYQPSVETYNQLLHLASE--QGSFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSYLPAFKVFGASAKVVHFLGRV--KPWNYTYDPKTKSVKSEAHDPNMTHPEFLILWWNIF 253

The following BLAST results are available for this feature:

BLAST of TCONS_00056774-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00056774-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GLYG	7.939e-29	32.05	Glycogenin-1 OS=Homo sapiens GN=GYG1 PE=1 SV=4	[more]

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TCONS_00056774-protein (polypeptide) - C. hemisphaerica