TCONS_00056780-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00056780-protein
Unique Name	TCONS_00056780-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	321

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00056780-protein ID=TCONS_00056780-protein|Name=TCONS_00056780-protein|organism=Clytia hemisphaerica|type=polypeptide|length=321bp
TLKFDVILFFQILAHLNVFCVLLCLAMGHSYQYYFLTPLVTFWFFVVYVT
MALFPRVTSNIVEENPKRLFLMAGKLVILFVFVFVVWAHENVCDWLFSRI
VIKELFVDVNGSVEKWRIHSGLHRYAVIFGMLCGYIYVNLKRLDLIKDTD
NDGNILPSTKYTIATMVVALCALLGYEIQAFTCHSKSLCDHTHSIASCVP
ILAFVLLRNLPGFLRTRYSLLFAWIGDMSLELFIGQYHIWLSNDGFGVHV
LIPGFPTLNAIVTTFTFVCTIHEVKQLCSTLADLLVTKDVRIMLRRLIIF
IILMFIVWWHKTHEKKPVFYV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_035763	XLOC_035763	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00056780	TCONS_00056780	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012419	Cas1_AcylTrans_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012419	Cas1p 10 TM acyl transferase domain	PFAM	PF07779	Cas1_AcylT	coord: 5..297 e-value: 5.8E-85 score: 285.9

Blast

[Close]

BLAST of TCONS_00056780-protein vs. Swiss-Prot (Human)
Match: CASD1 (N-acetylneuraminate 9-O-acetyltransferase OS=Homo sapiens GN=CASD1 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 9.553e-59
Identity = 115/287 (40.07%), Postives = 173/287 (60.28%), Query Frame = 0

Query:   11 QILAHLNVFCVLLCLAMGHSYQYYFLTPLVTFWFFVVYVTMALFPRVTSNIVEENPKRLFLMAGKLVILFVFVFVVWAHENVCDWLFSRIVIKELFVDVNGSVEKWRIHSGLHRYAVIFGMLCGYIYVNLKRLDLIKDTDNDGNILPSTKYTIATMVVALCALLGYEIQAFTCHSKSLCDHTHSIASCVPILAFVLLRNLPGFLRTRYSLLFAWIGDMSLELFIGQYHIWLSNDGFGVHVLIPGFPTLNAIVTTFTFVCTIHEVKQLCSTLADLLVTKDVRIMLRRL 297
            Q+L  LN   V+LC+ M   YQ+Y+  PLVT WF V+YVT+AL+P++       N    F +  KL  L +F+  +   +   + +FS   + + F ++ G+V +W     L RY V  GML  +IY+ L++  ++  ++  G  L S K +   + +++ + L Y I A +C +K+ C+  H   S V ILAF+L+RN+PG+ R+ YS  FAW G +SLELFI QYHIWL+ D  G+ VLIPG P LN IV+TF FVC  HE+ Q+ + LA +++ KD   +L+RL
Sbjct:  492 QVLFRLNFLVVVLCIVMDRPYQFYYFVPLVTVWFMVIYVTLALWPQIIQKKANGNCFWHFGLLLKLGFLLLFICFLAYSQGAFEKIFSLWPLSKCF-ELKGNVYEWWFRWRLDRYVVFHGMLFAFIYLALQKRQIL--SEGKGEPLFSNKISNFLLFISVVSFLTYSIWASSCKNKAECNELHPSVSVVQILAFILIRNIPGYARSVYSSFFAWFGKISLELFICQYHIWLAADTRGILVLIPGNPMLNIIVSTFIFVCVAHEISQITNDLAQIIIPKDNSSLLKRL 775

The following BLAST results are available for this feature:

BLAST of TCONS_00056780-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00056780-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CASD1	9.553e-59	40.07	N-acetylneuraminate 9-O-acetyltransferase OS=Homo ...	[more]

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TCONS_00056780-protein (polypeptide) - C. hemisphaerica