TCONS_00056820-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056820-protein
Unique NameTCONS_00056820-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length292

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056820-protein ID=TCONS_00056820-protein|Name=TCONS_00056820-protein|organism=Clytia hemisphaerica|type=polypeptide|length=292bp
MSEVRRASHAGSWYSSSKKELNSQLENWLSKASSKKVGTRALIAPHAGYS
YCGACAAFAYNRVDPTNIKRVFILGPSHHVSLGGCALTQTKTYSTPLYDL
IVDQEMNEELHKTGKFDKMSISTDEDEHSIEMHLPYIAKVMESKKGQFTV
VPVLVGHTSHDKELMYGKIFSKYLKDPENLFVISSDFCHWGSRFRYTYYD
KSKGDIHQSIEDLDKQGMKIIERLHTSEYYQYLERYSNTICGRKPIGIFL
NAVDQLKTDGTIFEFHQYAQSSKVKRMNDSSVSYAAGTLVSL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035796XLOC_035796Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056820TCONS_00056820Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002737MEMO1_fam
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002737MEMO1 familyPFAMPF01875Memocoord: 7..287
e-value: 2.7E-86
score: 289.0
IPR002737MEMO1 familyHAMAPMF_00055MEMO1coord: 3..290
score: 57.084
IPR002737MEMO1 familyCDDcd07361MEMO_likecoord: 6..287
e-value: 3.0742E-118
score: 342.249
NoneNo IPR availableGENE3D3.40.830.10coord: 6..290
e-value: 2.1E-54
score: 184.2
NoneNo IPR availableTIGRFAMTIGR04336TIGR04336coord: 5..286
e-value: 2.4E-55
score: 185.7

Blast
[Close]
BLAST of TCONS_00056820-protein vs. Swiss-Prot (Human)
Match: MEMO1 (Protein MEMO1 OS=Homo sapiens GN=MEMO1 PE=1 SV=1)

HSP 1 Score: 385.571 bits (989), Expect = 1.128e-135
Identity = 178/288 (61.81%), Postives = 220/288 (76.39%), Query Frame = 0 
Query:    5 RRASHAGSWYSSSKKELNSQLENWLSKASSKKVGTRALIAPHAGYSYCGACAAFAYNRVDPTNIKRVFILGPSHHVSLGGCALTQTKTYSTPLYDLIVDQEMNEELHKTGKFDKMSISTDEDEHSIEMHLPYIAKVMESKKGQFTVVPVLVGHTSHDKELMYGKIFSKYLKDPENLFVISSDFCHWGSRFRYTYYDKSKGDIHQSIEDLDKQGMKIIERLHTSEYYQYLERYSNTICGRKPIGIFLNAVDQLKTDG--TIFEFHQYAQSSKVKRMNDSSVSYAAGTLV 290
            R ASHAGSWY++S  +LN+QLE WLS+  S K   RA+IAPHAGY+YCG+CAA AY +VDP+  +R+FILGPSHHV L  CAL+    Y TPLYDL +DQ++  EL KTG F++MS+ TDEDEHSIEMHLPY AK MES K +FT++PVLVG  S  KE  +GK+FSKYL DP NLFV+SSDFCHWG RFRY+YYD+S+G+I++SIE LDK GM IIE+L    +  YL++Y NTICGR PIG+ LNA+ +L+ +G    F F  YAQSS+ +   DSSVSYAAG L 
Sbjct:    8 REASHAGSWYTASGPQLNAQLEGWLSQVQSTKRPARAIIAPHAGYTYCGSCAAHAYKQVDPSITRRIFILGPSHHVPLSRCALSSVDIYRTPLYDLRIDQKIYGELWKTGMFERMSLQTDEDEHSIEMHLPYTAKAMESHKDEFTIIPVLVGALSESKEQEFGKLFSKYLADPSNLFVVSSDFCHWGQRFRYSYYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGRHPIGVLLNAITELQKNGMNMSFSFLNYAQSSQCRNWQDSSVSYAAGALT 295
The following BLAST results are available for this feature:
BLAST of TCONS_00056820-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEMO11.128e-13561.81Protein MEMO1 OS=Homo sapiens GN=MEMO1 PE=1 SV=1[more]
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