TCONS_00056852-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056852-protein
Unique NameTCONS_00056852-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length828

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056852-protein ID=TCONS_00056852-protein|Name=TCONS_00056852-protein|organism=Clytia hemisphaerica|type=polypeptide|length=828bp
MTTTYDISPTLVQCFGIILIGYLTGKFKMITPNQGKGLATFIGTFSLPAL
IFKAMIEVKFPLINWTFWTALLIAKAIVFLLVMIPSLFLEKDKPYAAAGL
YSIFVSQSNDMAFGLPLLQAVFNDPQTKFLVNYVFLTAPISLAILNPIGF
ALLEYQKAKDYQIESGKKSSIGRIMWTTVKGVITNPLVFMIVFAIIFNFI
FHSKLPPVIDGLFTSFSNAFGATALFYLGWKLGCCQPDDEKMTGLSYALP
VILVLLKSVFMPILMTFLTSFLTDGFINDSNSVQAGANATMKYKNATSYK
TFAFLYGEIPTAPTVLLYANKYNFGEELVGSGLVLGTLFAAPMLFISIRM
LQVNNMLNVNQFDVLIGKVAKDVSIISIVCCVYVLAVLFSLRAYRRKPHS
LTMILIGFQFLLALSGAIFKDFIDVQSGSLRVLVFFVLFALFSCPLWCSM
VAHRLSLIARKKDITARIHRYLLVACFCIPFVMALIVAMVTPHTDLSDGT
TYFYLFNCFKQHASIAALYTIINVFTLACILFAFICVKKMDLLRTVKTNN
SYSPLLQKSYKYSTLQGEPLKLESHKVDYPLHHITREESYGDETSIERSM
ESMESIQINQKMSERSHITHHVVLLLIMSIVIALNISITVWSNLDKSLSN
VQGLYLELRMASVVLTYGQGFFSFATFGFIKEFFMLGCFEKVYKQYLKLR
GRKKITLECESELDIDILLLRKRFIKHHLVQCSKDIVRCLSFRLRKFEGV
FTGTCLIDWLLEEGLITDRADGIKYGNMLLRGRVIEHCLQEHYFYDLPYF
YQFTGRAFEFYALQQETGSIEVALKDEN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035813XLOC_035813Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056852TCONS_00056852Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000591DEP_dom
IPR004776Mem_trans
IPR011991WHTH_DNA-bd_dom
Vocabulary: Biological Process
TermDefinition
GO:0035556intracellular signal transduction
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
100200300400500600700800Expect = 6.7E-8 / Score = 31.4Score = SequenceSM00049PF00610PS50186PF03547G3DSA:1.20.1070.10G3DSA:1.10.10.10SSF46785
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000591DEP domainSMARTSM00049DEP_3coord: 735..805
e-value: 1.1E-8
score: 44.9
IPR000591DEP domainPFAMPF00610DEPcoord: 743..803
e-value: 4.7E-12
score: 45.7
IPR000591DEP domainPROSITEPS50186DEPcoord: 747..805
score: 12.483
IPR004776Membrane transport proteinPFAMPF03547Mem_transcoord: 10..169
e-value: 1.6E-14
score: 53.1
NoneNo IPR availableGENE3D1.20.1070.10coord: 364..681
e-value: 6.7E-8
score: 31.4
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 718..819
e-value: 2.9E-14
score: 52.5
IPR011991Winged helix-turn-helix DNA-binding domainSUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 721..810

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056852-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
100200300400500600700800Expect = 4.98e-75 / Id = 32.53Expect = 2.21e-20 / Id = 32.53SequenceGP155
Match NameE-valueIdentityDescription
GP1554.975e-7532.53Integral membrane protein GPR155 OS=Homo sapiens G... [more]
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