TCONS_00056865-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056865-protein
Unique NameTCONS_00056865-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length183

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056865-protein ID=TCONS_00056865-protein|Name=TCONS_00056865-protein|organism=Clytia hemisphaerica|type=polypeptide|length=183bp
MVRTRADNCSRKAVASKAPRKNFNAGGSSSSSSAADGSQNTSFNVVNHAK
MWPAPKWQKGIGSFFQKRENTSNENESSSGSSSAASSQSPTKDERKEETN
DVIVLEEKTDNSPDGATIDTENASDKNENTSDKENDKDINDNELRKTVKR
PSGKQKVSVSGKSLNQSNKKKRRVVLHDSSDEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035824XLOC_035824Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056865TCONS_00056865Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031444PCNA-AF
Vocabulary: Biological Process
TermDefinition
GO:0006974cellular response to DNA damage stimulus
GO:0051726regulation of cell cycle
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006974 cellular response to DNA damage stimulus
biological_process GO:0051726 regulation of cell cycle
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031444PCNA-associated factorPFAMPF15715PAFcoord: 1..68
e-value: 4.5E-15
score: 55.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availablePRODOMPD072652coord: 1..66
e-value: 2.0E-5
score: 113.0

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056865-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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