TCONS_00056884-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056884-protein
Unique NameTCONS_00056884-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length547

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056884-protein ID=TCONS_00056884-protein|Name=TCONS_00056884-protein|organism=Clytia hemisphaerica|type=polypeptide|length=547bp
MRGSKMTLDADSSCKIRLLDDVELSYEFKKETKGHELFSFVCEQLSLLEI
DYFGLRYVDANKQRHWLDPSKEIIKQLKECRPQYMFFFRVKFYPTDPTKL
REEITRYQLYLQLKRDILHGRLLCPFNNITDLAAHIVQAELGDFDEDEHG
TTYLSGIKLLPRQNEKLEEKIIEYHKSLVGYNPAEAERRFLNLARSQDLY
GVDPHPCKDHEDFPLYLGLTPQGIQIIREARRVFGIGWTEVSKVSYENKH
FYIQVVSEKKKKNYAFRLTDTPACKHLWKCAVEHMTFYSEEPVKTQVPRR
SALSPQNIFRRSKYKFSGKTESELKNESENIRRTTPPTIQRKSSLRLSIQ
ANNRKSCISMPDLEQIQAKFRNTPKDERNGTGNRVENGGDSERSSNSSAS
KLNGEKEDELAEFETKEFPSSDHESARNSQIFDNVSTSSSQDASSTGSSS
QQPIVNMSPPVIQVENVESVTEDQTETRPDFDHVDSPVVQSQQKQNIECI
KQTVPPATLSATLNNLTGGNQALLWVMLVLVILPIAYFIQLSLTSKS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035837XLOC_035837Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056884TCONS_00056884Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000798Ez/rad/moesin-like
IPR019749Band_41_domain
IPR018980FERM_PH-like_C
IPR014847FERM-adjacent
IPR011993PH_dom-like
IPR018979FERM_N
IPR014352FERM/acyl-CoA-bd_prot_3-hlx
IPR019748FERM_central
IPR019747FERM_CS
IPR000299FERM_domain
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0008092cytoskeletal protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005856 cytoskeleton
molecular_function GO:0008092 cytoskeletal protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000798Ezrin/radixin/moesin-likePRINTSPR00661ERMFAMILYcoord: 77..96
score: 39.44
coord: 208..228
score: 27.78
coord: 25..44
score: 26.11
coord: 120..141
score: 28.28
IPR019749Band 4.1 domainPRINTSPR00935BAND41coord: 185..201
score: 34.93
coord: 45..57
score: 51.12
coord: 111..124
score: 52.98
coord: 124..144
score: 39.78
IPR019749Band 4.1 domainSMARTSM00295B41_5coord: 8..205
e-value: 6.7E-63
score: 225.0
IPR018980FERM, C-terminal PH-like domainSMARTSM01196FERM_C_3coord: 209..296
e-value: 1.7E-18
score: 77.5
IPR018980FERM, C-terminal PH-like domainPFAMPF09380FERM_Ccoord: 210..291
e-value: 2.5E-16
score: 59.7
IPR014847FERM adjacent (FA)SMARTSM01195FA_2coord: 306..352
e-value: 5.2E-4
score: 29.3
NoneNo IPR availableGENE3D3.10.20.90coord: 11..91
e-value: 2.0E-27
score: 94.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 370..460
IPR011993PH domain-likeGENE3D2.30.29.30coord: 200..292
e-value: 1.3E-23
score: 82.8
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 198..340
IPR018979FERM, N-terminalPFAMPF09379FERM_Ncoord: 16..79
e-value: 1.0E-15
score: 57.3
IPR014352FERM/acyl-CoA-binding protein, 3-helical bundleGENE3D1.20.80.10coord: 92..196
e-value: 1.9E-32
score: 111.4
IPR019748FERM central domainPFAMPF00373FERM_Mcoord: 96..205
e-value: 1.0E-18
score: 67.7
IPR019748FERM central domainCDDcd14473FERM_B-lobecoord: 105..196
e-value: 1.49925E-27
score: 105.406
IPR019748FERM central domainSUPERFAMILY47031Second domain of FERMcoord: 96..200
IPR019747FERM conserved sitePROSITEPS00660FERM_1coord: 66..96
IPR000299FERM domainPROSITEPS50057FERM_3coord: 12..292
score: 85.487
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 14..94

Blast
[Close]
BLAST of TCONS_00056884-protein vs. Swiss-Prot (Human)
Match: FRMD5 (FERM domain-containing protein 5 OS=Homo sapiens GN=FRMD5 PE=1 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 3.521e-99
Identity = 165/405 (40.74%), Postives = 241/405 (59.51%), Query Frame = 0 
Query:    1 MRGSKMTLDADSSCKIRLLDDVELSYEFKKETKGHELFSFVCEQLSLLEIDYFGLRYVDANKQRHWLDPSKEIIKQLKECRPQYMFFFRVKFYPTDPTKLREEITRYQLYLQLKRDILHGRLLCPFNNITDLAAHIVQAELGDFDEDEHGTTYLSGIKLLPRQNEKLEEKIIEYHKS-LVGYNPAEAERRFLNLARSQDLYGVDPHPCKDHEDFPLYLGLTPQGIQIIREARRVFGIGWTEVSKVSYENKHFYIQVVSEKKKKNYAFRLTDTP-ACKHLWKCAVEHMTFYSEEPVKTQVPRRSALSPQNIFRRSKYKFSGKTESELKNESENIRRTTPPTIQRKSSL------------RLSIQANNRKSCISMPDLEQIQAKFRNTPKDERNGTGNRVENGGDS 391
            M GS  +L+ + SC +RLLDD E +   +++ KG  LF  +C  L+LLE DYFG+R+VD +KQRHWL+ +K ++KQL+  +P +   FRVKFYP DP  L+EEITRY ++LQ+KRD+ HGRLLC  ++   LAA+I+QAE+GD+D  +H   Y S  +  P+ +EKLE KI E HK+ L G  PA +E  FL  A++ + YGVDPHPCKD      +L  TP G  +++  +RV  I W EV+K+ +E K FY+ V  +++KK        TP ACKHLWKC +E+  FY  E   +QV  R+  S    F+ S++++SG+   E+   S  I+R  PP I R   +            RLS     R+  + +  +E +++      +D  + T  R  + GD+
Sbjct:    6 MSGSSRSLEREYSCTVRLLDDSEYTCTIQRDAKGQYLFDLLCHHLNLLEKDYFGIRFVDPDKQRHWLEFTKSVVKQLRS-QPPFTMCFRVKFYPADPAALKEEITRYLVFLQIKRDLYHGRLLCKTSDAALLAAYILQAEIGDYDSGKHPEGYSSKFQFFPKHSEKLERKIAEIHKTELSGQTPATSELNFLRKAQTLETYGVDPHPCKDVSGNAAFLAFTPFGFVVLQGNKRVHFIKWNEVTKLKFEGKTFYLYVSQKEEKKIILTYFAPTPEACKHLWKCGIENQAFYKLEK-SSQV--RTVSSSNLFFKGSRFRYSGRVAKEVMESSAKIKR-EPPEIHRAGMVPSRSCPSITHGPRLSSVPRTRRRAVHISIMEGLESL-----RDSAHSTPVRSTSHGDT 400
The following BLAST results are available for this feature:
BLAST of TCONS_00056884-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FRMD53.521e-9940.74FERM domain-containing protein 5 OS=Homo sapiens G... [more]
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