Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00056983-protein ID=TCONS_00056983-protein|Name=TCONS_00056983-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1066bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00056983-protein vs. Swiss-Prot (Human)
Match: SMC5 (Structural maintenance of chromosomes protein 5 OS=Homo sapiens GN=SMC5 PE=1 SV=2) HSP 1 Score: 685.256 bits (1767), Expect = 0.000e+0 Identity = 387/1049 (36.89%), Postives = 616/1049 (58.72%), Query Frame = 0 Query: 28 MDGKIVRIKLKDFLTYDDCEFKPGEKLNVILGPNGTGKSSIVCAICLGLGGRTNLLGRAKLLSDYVKHRKKEATIEIELFKKNESNLIVRRTFNTQSTNSKFEINGRVVTESAVINTVKKMNIQMDNLCQFLPQDRVIEFAKMNARELLVATEKAVGPDGMHADHVKLIDLRKKSGELESMIDGRKTYKEQIETSNQRLERDVKRYKEREKHQEKIQILKKKRPWVLYEEARKETIAAKDAKKVVEKKIKDMRKKHSPLKEKIDKAKVALKKAEDEIKVLSAEMNKTGQDMKKIDDKLEKQNDRIAEARQDFTSVQQDEQERHKKISQLEKQIESLQREYEEAPDPEAMKPRITEIHNEVKAIQHQLNELNRQKTEILSDNTNLKLQITALKRRLAEVDNVDHQKLETLRRVDSDTYNAVLWLRQNKQMFSGTVYEPIMTQINMHDMKNAFYLENAISFRDMKAFVCQNREDQKLLSNQTRERLNLQISAVCPPRDAKDQYPPQQRIDNYKRFGFHSYITDLFQCPKTVYQYLCEAFHLHNIPIGVEAIDKNPENVINNTSLFRFYTPNNSYSINKSRYADKKSTSVNTVRKDANLLNPSVDLEVKKQLDTELSQHEHQMKVNNGKLEEISRKENALQKEQEKLRTEKKSLMTQMKKRTTLSNQIETRVKRLDEEKKTKIDIEKEERKFRDKVKKINATRIALVKEYQTVVQRSLEHGKEHIRLNIRRLQVKREVEVAEKNFRIVDSDLNNFIEQFENLSRGHNEAKNRAKKLLDEAKRLTGSTPDSLVP---------------DALNRVFETLPDTIEEIEELICEEEASLNCQFETNPEVIKNYEKNKREISKLETELQDKDGELTEIKNTIEELLQSWLVPLEELINRINERYSDFFRRMGCAGEVLLKRDPNDDYSQYGIQINVKFRAENKMKELTSYFQSGGERSVSTMLYLISLQELTKCPFRLVDEINQGMDPKNERRVFELVVETVCRPNTSQYFLITPKLLPDLHYTEQMTILTVLNGYYMVPHNKFRLHDLIERKRKL 1061 ++G IVRI +++FLTYD CE PG LN+I+G NGTGKSSIVCAICLGL G+ +GRA + +VK +EIELF+ + NL++ R + S + IN + T+ V V +NIQ+ NLCQFLPQD+V EFAK++ ELL ATEK++GP MH H +L +LR+K +LE+ + Y +++ N+R ++DV+R+ ER++H + I++L+ KRPWV YE R+E K + V+++++ +++ P+ +I++ + E IK + ++ + Q K+ D +E+++ I E +Q Q +E +R ++I K IE LQ E + + E ++P+I I N+++ IQ + + + + L+ + ++ + DN+ +QK + LR+ DTY+AVLWLR N+ F V EPIM INM D KNA Y+EN I D++AFV +++ED ++ + R+ L+++AV P+ + P + ++ K++GF SY+ +LF P V YLC +H+H +P+G E + E VI T L + YT Y + S Y++K +S NT K A L +VDLE ++ L+ +L + +++ + L + L+ + +LR +KK L+ + K+ L +I +++ L ++ ++E+EERK K+K+IN + LV E +++ + + L ++ V E E ++ S L + F L + K+L+ A+++ + +P +L VF+ LP+T++EI+ L+ EE + +C NP +++ Y K + EI +L EL+ K EL + + I ++ + WL PL+EL+ +INE++S+FF M CAGEV L + +DY +YGI+I VKFR+ ++ ELT + QSGGERSVSTMLYL++LQEL +CPFR+VDEINQGMDP NERRVFE+VV T C+ NTSQYF ITPKLL +L Y+E+MT+L V NG +M+ N + L R+R++ Sbjct: 49 VEGSIVRISMENFLTYDICEVSPGPHLNMIVGANGTGKSSIVCAICLGLAGKPAFMGRADKVGFFVKRGCSRGMVEIELFRAS-GNLVITREIDVAKNQSFWFINKKSTTQKIVEEKVAALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSIGPPEMHKYHCELKNLREKEKQLETSCKEKTEYLQKMVQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEEVKLVRDRVKEEVRKLKEGQIPVTCRIEEMENERHNLEARIKEKATDIKEASQKCKQKQDVIERKDKHIEELQQALIVKQNEELDRQRRIGNTRKMIEDLQNELKTTENCENLQPQIDAITNDLRRIQDEKALCEGEIIDKRRERETLEKEKKSVDDHIVRFDNLMNQKEDKLRQRFRDTYDAVLWLRNNRDKFKQRVCEPIMLTINMKDNKNAKYIENHIPSNDLRAFVFESQEDMEVFLKEVRDNKKLRVNAVIAPKSSYADKAPSRSLNELKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTEKTRERIERVIQETRLKQIYTAEEKYVVKTSFYSNKVISS-NTSLKVAQFLTVTVDLEQRRHLEEQLKEIHRKLQAVDSGLIALRETSKHLEHKDNELRQKKKELLERKTKKRQLEQKISSKLGSLKLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTNLIKICTSLHIQKVDLILQNTTVISEKNKLESDYMAASSQLRLTEQHFIELDENRQRLLQKCKELMKRARQVCNLGAEQTLPQEYQTQVPTIPNGHNSSLPMVFQDLPNTLDEIDALLTEERSRASCFTGLNPTIVQEYTKREEEIEQLTEELKGKKVELDQYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPHMLEPNTWNLKAFQRRRRRI 1095 The following BLAST results are available for this feature:
BLAST of TCONS_00056983-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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