TCONS_00057019-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057019-protein
Unique NameTCONS_00057019-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length138

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057019-protein ID=TCONS_00057019-protein|Name=TCONS_00057019-protein|organism=Clytia hemisphaerica|type=polypeptide|length=138bp
MAQQETGSKYAVKLKPDFDNPKWINRHRFMFNFLDINGNGKITLDEIVSK
ASDDICAKLNATPEQTQRHQDAVEAFFKAIGMDYGKEVEFPEFCEGWKRL
ATSDLKLWSQNKTTLIRRWGDVVFDIFDKDGSGTISLD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035914XLOC_035914Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057019TCONS_00057019Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
MAQQETGSKYAVKLKPDFDNPKWINRHRFMFNFLDINGNGKITLDEIVSKASDDICAKLNATPEQTQRHQDAVEAFFKAIGMDYGKEVEFPEFCEGWKRLATSDLKLWSQNKTTLIRRWGDVVFDIFDKDGSGTISLD20406080100120Score = 6.033Score = 9.827Score = 8.99Expect = 4.5E-7 / Score = 29.5Expect = 4.7E-6 / Score = 25.8Score = Score = SequencePF13202PS50222PS50222PS50222G3DSA:1.10.238.10G3DSA:1.10.238.10G3DSA:1.10.238.10PS00018SSF47473
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 30..46
e-value: 0.003
score: 16.9
coord: 123..137
e-value: 0.0062
score: 15.9
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 68..103
score: 6.033
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 123..138
score: 9.827
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 22..57
score: 8.99
NoneNo IPR availableGENE3D1.10.238.10coord: 125..138
e-value: 0.024
score: 14.1
NoneNo IPR availableGENE3D1.10.238.10coord: 39..86
e-value: 4.5E-7
score: 29.5
NoneNo IPR availableGENE3D1.10.238.10coord: 87..124
e-value: 4.7E-6
score: 25.8
coord: 7..38
e-value: 0.004
score: 16.5
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 35..47
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 20..138

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057019-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
MAQQETGSKYAVKLKPDFDNPKWINRHRFMFNFLDINGNGKITLDEIVSKASDDICAKLNATPEQTQRHQDAVEAFFKAIGMDYGKEVEFPEFCEGWKRLATSDLKLWSQNKTTLIRRWGDVVFDIFDKDGSGTISLD20406080100120Sequence
Match NameE-valueIdentityDescription
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