TCONS_00057045-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057045-protein
Unique NameTCONS_00057045-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length296

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057045-protein ID=TCONS_00057045-protein|Name=TCONS_00057045-protein|organism=Clytia hemisphaerica|type=polypeptide|length=296bp
MIQILLILSGSVEVNPGPRRTRVKFPCGECKKAITTNNAIACDECNKWYH
VNCLSMNASVFNAYTKDELLEWICPNCALANISNSLFDSFSASSTAESDN
DDDENQNNPPKTKRQSLRIMIVNFQSIWGKKENLQKLLYDHNIDVVLGSE
THIDPSIGDSDILPNGYRAFRNDRLHKSGGGVIIIVKNSLFAVEAAKSKD
SESISVKIETFQKPIILTSVYRPTNKNQKYLDSLIKDIKSTLSKFKSNPH
WIGGDLNLPDIDWSTNSITSSQYPKSLNESFLDMLGDNNLEQLVDF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035940XLOC_035940Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057045TCONS_00057045Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR005135Endo/exonuclease/phosphatase
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 26..78
e-value: 1.4E-9
score: 47.8
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF14529Exo_endo_phos_2coord: 217..292
e-value: 2.8E-8
score: 33.5
IPR005135Endonuclease/exonuclease/phosphataseGENE3D3.60.10.10coord: 116..295
e-value: 3.0E-15
score: 55.9
IPR005135Endonuclease/exonuclease/phosphataseSUPERFAMILY56219DNase I-likecoord: 116..288
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 27..78
e-value: 2.0E-9
score: 37.1
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 24..80
score: 9.517
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 13..86
e-value: 1.6E-10
score: 40.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..112
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 27..77
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 25..78

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057045-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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