TCONS_00057055-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00057055-protein
Unique Name	TCONS_00057055-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	600

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00057055-protein ID=TCONS_00057055-protein|Name=TCONS_00057055-protein|organism=Clytia hemisphaerica|type=polypeptide|length=600bp
MTKQYYWSLQRASSTRKVNRLSRENQEILPHNQSNSDRKKKRVFQIKAQN
KRRFQSNPQTHTKTLCKTTMAPCSNTKCQQQPEPPFIYQKPPSSSNTKES
FDNLNDIHQSSPIITEDDTESPEPPLQPVSPEEDIIFQLHPQRWFVLASY
CLLSLVCGSNWLCFPAVSNILREYYQISILSINMLSIVFGICLVLFSIPF
ALLLNKYGLAVVMQTSAFLNLTGALIKYFGDDADHGYWFLLCGNTFHALS
VAGFLFLPGDIASTWFGEHEAGKATSLCVAFDALGTGVGFLLATTIVQGN
KDPYIVQGSIKQFLLSQLIPSVAVFLFVLMFVRRRPPHPPNFKELAIRRD
EMFRKHVQLQYLLDIEQVLDRKGNVSEPVHVRRLPCIKQHRILMSSLFKL
IKNTDFQLIFHMQGIVASIEGLYEILLNEMLIDIFPGSERAIGILGFVSV
ILGFTTNILVGALIDKTGHYRRVSFIVFFLTTIFASLWYIAIEYIHNFLA
ISIILSLLMSISTSYYTIAFAHGAQVADNVSASAIGVMLVLTSQIYDTMS
SFVATEILSSFGSSYVNGLAITLCVVATMLSFFVGNGDNKRTEVAAPAHV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_035947	XLOC_035947	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00057055	TCONS_00057055	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 394..596 e-value: 1.1E-10 score: 40.6
None	No IPR available	GENE3D	1.20.1250.20		coord: 137..345 e-value: 7.5E-23 score: 80.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..41
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 151..539 e-value: 1.7E-20 score: 73.2
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 147..584 e-value: 3.00084E-17 score: 81.2061
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 387..586 coord: 132..341

Blast

[Close]

BLAST of TCONS_00057055-protein vs. Swiss-Prot (Human)
Match: FLVC1 (Feline leukemia virus subgroup C receptor-related protein 1 OS=Homo sapiens GN=FLVCR1 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.219e-31
Identity = 121/478 (25.31%), Postives = 202/478 (42.26%), Query Frame = 0

Query:  111 SPIITEDDTES--------PEPPLQPVSPEEDIIFQLHPQRWFVLASYCLLSLVCGSNWLCFPAVSNILREYYQISILSINMLSIVFGICLVLFSIPFALLLNKYGLAVVMQTSAFLNLTGALIKYFGDDADHGYWFLLCGNTFHALSVAGFLFLPGDIASTWFGEHEAGKATSLCVAFDALGTGVGFLLATTIVQGNK-DPYIVQGSIKQFLLSQLIPSVAVFLFVLMFV--RRRPPHPPNFKELAIRRDEMFRKHVQLQYLLDIEQVLDRKGNVSEPVHVRRLPCIKQHRILMSSLFKLIKNTDFQLIFHMQGIVASIEGLYEILLNEMLIDIFPGSERAIGILGFVSVILGFTTNILVGALIDKTGHYRRVSFIVFFLTTIFASLWYIAIE--YIHNFLAISIILSLLMSISTSYYTIAFAHGAQVADNVSASAIGVMLVLTSQIYDTMSSFVATEILSSFGSSYVNGLAITLCV 575
            +P+  E++T++         E P    SP    +  L P+R+ VL  + L SLV    W+ +  +SN+   +Y +++L I+ LS+V+ +  V    P   LL+  GL +     + LN  GA IK  G    H +W  + G    +++    L LP  IAS WFG  E   A +  V  + LGT VGFLL   +V   + D  ++  +I          +VA  LF+L  +  + +P +PP+  + A++                           S P          +      S+  L KN  F L+    GI+         LLN+M++  + G E   G +G   V+ G   +IL G  +D T  Y++ + IV+ L+ I   ++   ++  YI        +L   M   T Y  + F    ++    S      +L  ++QI+  + +    ++ S +G    N   I LCV
Sbjct:   69 TPLAPEEETQARLLPAGAGAETPGAESSPLP--LTALSPRRFVVLLIFSLYSLVNAFQWIQYSIISNVFEGFYGVTLLHIDWLSMVYMLAYVPLIFPATWLLDTRGLRLTALLGSGLNCLGAWIK-CGSVQQHLFWVTMLGQCLCSVAQVFILGLPSRIASVWFGPKEVSTACATAVLGNQLGTAVGFLLPPVLVPNTQNDTNLLACNISTMFYGT--SAVATLLFILTAIAFKEKPRYPPSQAQAALQD--------------------------SPP----------EEYSYKKSIRNLFKNIPFVLLLITYGIMTGAFYSVSTLLNQMILTYYEGEEVNAGRIGLTLVVAGMVGSILCGLWLDYTKTYKQTTLIVYILSFIGMVIFTFTLDLRYIIIVFVTGGVLGFFM---TGYLPLGFEFAVEITYPESEGTSSGLLNASAQIFGILFTLAQGKLTSDYGPKAGN---IFLCV 499

The following BLAST results are available for this feature:

BLAST of TCONS_00057055-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00057055-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FLVC1	6.219e-31	25.31	Feline leukemia virus subgroup C receptor-related ...	[more]

You are here

TCONS_00057055-protein (polypeptide) - C. hemisphaerica