TCONS_00057069-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00057069-protein
Unique Name	TCONS_00057069-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	543

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00057069-protein ID=TCONS_00057069-protein|Name=TCONS_00057069-protein|organism=Clytia hemisphaerica|type=polypeptide|length=543bp
MGERKGVNKYYPPDYDPSKGGLNAYHGTHALRERAKKIDQGILIIRFEMP
YNIWCNGCGNHIGMGVRYNAEKRRVGAYYSTPIYKFRMKCALCDQFFEIR
TDPQNCDYEILSGCRRKEERWDTEAAGNVQTTHREVKEKMMTNAMFQLEH
NAEDKVKVKKLAPTLTRLEEIRDTWDDDFSVNQKLRKKFRQEKKEIKDKE
DLNSSFKNNKGLPEDFVLQDEHQDDVIKSKRMRYGEDTRPDHVRKRQRTS
IKQSSIFGIEARKFQLSKALSTSSPKQKTPSTSSSPTDSNFKAMALGIVR
KRKRSAASSETDLTPSTQSETQKSGLNKSASLEHSITSVNESQIILDSIS
NEKVSSKSTLDSSKSDNSKISIDKSQSKTSTIETVDTSACNIIHTKDIDV
NLNEAEFSKRLVNKNLELTTSKLVEKNADEKSENREESKTLFSTDRNFVI
TNSNKNDIKSKTENTEPTDISADGKDDIPNKGAVTPNTLIQENTDSDRTD
ISKNTSADGKDITTSKGAIADSSISSLVSYGGSSSSGEEDDNG

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_035952	XLOC_035952	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00057069	TCONS_00057069	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007590	CWC16

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 182..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 355..383
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 268..329
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 453..543
IPR007590	CWC16 protein	PFAM	PF04502	DUF572	coord: 1..360 e-value: 1.6E-80 score: 271.0

Blast

[Close]

BLAST of TCONS_00057069-protein vs. Swiss-Prot (Human)
Match: CC130 (Coiled-coil domain-containing protein 130 OS=Homo sapiens GN=CCDC130 PE=1 SV=2)

HSP 1 Score: 302.368 bits (773), Expect = 5.888e-98
Identity = 154/326 (47.24%), Postives = 207/326 (63.50%), Query Frame = 0

Query:    1 MGERKGVNKYYPPDYDPSK-GGLNAYHGTHALRERAKKIDQGILIIRFEMPYNIWCNGCGNHIGMGVRYNAEKRRVGAYYSTPIYKFRMKCALCDQFFEIRTDPQNCDYEILSGCRRKEERWDTEAAGNVQTTHREVKEKMMTNAMFQLEHNAEDKVKVKKLAPTLTRLEEIRDTWDDDFSVNQKLRKKFRQEKKEIKDKEDLNSSFKNNKGLPEDFVLQDEHQDDVIKSKRMRYGEDTRPDHVRKRQRTSIKQSSIFGIEARKFQLSKALSTSSPKQKTPSTSSSPTDSNFKAMALGIVRKRKRSAASSETDLTPSTQSETQKSG 325
            MGERKGVNKYYPPD++P K G LN YH +H LRERA+K+ QGILIIRFEMPYNIWC+GC NHIGMGVRYNAEK++VG YY+TPIY+FRMKC LC  + E++TDP NCDY I+SG +RKEERWD      V TT  E K+K+ T+AMF+LEH   D+  +KK  PTL+ ++E +  W DDF++N  LR++FR++KK I+++E+ + + +    L     L  E +DD   +  +++      +  +K +RT I   S F         SK   +   K+   S  ++   S      LGIVR+R R    S     P   ++T KSG
Sbjct:    1 MGERKGVNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCKNHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQRKEERWDMADNEQVLTTEHEKKQKLETDAMFRLEHGEADRSTLKKALPTLSHIQEAQSAWKDDFALNSMLRRRFREKKKAIQEEEERDQALQAKASL--TIPLVPETEDDRKLAALLKFHTLDSYEDKQKLKRTEIISRSWFPSAPGSASSSKV--SGVLKKLAQSRRTALATSPITVGDLGIVRRRSRDVPES-----PQHAADTPKSG 317

The following BLAST results are available for this feature:

BLAST of TCONS_00057069-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00057069-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CC130	5.888e-98	47.24	Coiled-coil domain-containing protein 130 OS=Homo ...	[more]

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TCONS_00057069-protein (polypeptide) - C. hemisphaerica