TCONS_00057241-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00057241-protein
Unique Name	TCONS_00057241-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	540

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00057241-protein ID=TCONS_00057241-protein|Name=TCONS_00057241-protein|organism=Clytia hemisphaerica|type=polypeptide|length=540bp
LWKRSGAWFFNSMPKYTLPEKEEYRYGMMNRGTGSLYDGTDSPMSKGSVY
NLHRNDDSESADEASDSDADETQSIKAFALPEDRRSLYSGFMMDDEDAMG
ITPRRNAVSGGGEPMPPQKKAASKTSSSESDHNTRTERKFTSQASLLSSD
NSSNDERRGSATSLSSTETPRKKLGIRDRVLRKHSKGTEDEDRHSSKFER
SPGQLRKTGSIISDVSIPSHNGASTEGSEQDIDALFQDYEKEQANKGVEQ
KEYTGSCGMIEFTLQYDQNTQELLVIVHNCKGLKGDKGKTPSLPYVKTYI
LPEAQKATKKRTVALKKVADPVYNETLVYYGVSPIDIENKGLKLCVMDEN
KNSVIGETSIPMKTLSTRPVQQFRRILDLKSNDSALFLDTKKTLSNPGRI
ELALHYLSKQGKLVVGVIRCSGLLAMDPNGYSDPYVKCYLLPDPHKRTKQ
KTQVKKKTLNPEFNEEFTYKIPHSELAKRTLHISVWDHDVGRSNDFIGGV
TLGIEASGDLLRHWFETLQTQDRRVIKWHTLTETCPIIKE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_036059	XLOC_036059	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00057241	TCONS_00057241	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000008	C2_dom
IPR001565	Synaptotagmin

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	PRINTS	PR00360	C2DOMAIN	coord: 428..440 score: 60.91 coord: 457..470 score: 56.06 coord: 481..489 score: 48.71
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 272..374 e-value: 1.2E-8 score: 44.7 coord: 412..526 e-value: 5.2E-23 score: 92.4
IPR000008	C2 domain	GENE3D	2.60.40.150		coord: 388..539 e-value: 9.3E-44 score: 148.4
IPR000008	C2 domain	GENE3D	2.60.40.150		coord: 255..383 e-value: 1.6E-21 score: 76.0
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 411..516 e-value: 3.5E-26 score: 91.4 coord: 273..368 e-value: 2.5E-11 score: 43.7
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 412..501 score: 19.159
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 272..359 score: 11.759
IPR000008	C2 domain	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 250..373
IPR000008	C2 domain	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 394..519
IPR001565	Synaptotagmin	PRINTS	PR00399	SYNAPTOTAGMN	coord: 472..487 score: 42.1 coord: 492..502 score: 50.8 coord: 400..415 score: 36.76 coord: 415..428 score: 39.71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..228

Blast

[Close]

BLAST of TCONS_00057241-protein vs. Swiss-Prot (Human)
Match: DOC2B (Double C2-like domain-containing protein beta OS=Homo sapiens GN=DOC2B PE=1 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 2.730e-86
Identity = 147/333 (44.14%), Postives = 201/333 (60.36%), Query Frame = 0

Query:  229 EQDIDALFQDY--------------------EKEQANKGVEQKEYTGSCGMIEFTLQYDQNTQELLVIVHNCKGLKGDKGKTPSLPYVKTYILPEAQKATKKRTVALKKVADPVYNETLVYYGVSPIDIENKGLKLCVMDENK---NSVIGETSIPMKTLSTRPVQQFRRILDLKSNDSALFLDTK--KTLSNPGRIELALHYLSKQGKLVVGVIRCSGLLAMDPNGYSDPYVKCYLLPDPHKRTKQKTQVKKKTLNPEFNEEFTYKIPHSELAKRTLHISVWDHDVGRSNDFIGGVTLGIEASGDLLRHWFETLQTQDRRVIKWHTLTETCP 536
            ++D+D LF  Y                    E E    G E  + T + G ++F+L YDQ    L   +   KGLK       + PYVK ++LP A KA K RT  L+   +P +NETL YYG++  D+  K L++ V DE+K   N  IGET +P+K L     + F   L+       L +D    K+L   GRI ++L Y S++  L+VG++RC+ L AMD NGYSDPYVK YL PD  K++K KT VKKKTLNPEFNEEF Y+I H +LAK++L ++VWD+D+G+SNDFIGGV LGI A G+ L+HWF+ L+ +D+R+ +WHTLT   P
Sbjct:   80 DEDVDQLFGAYGSSPGPSPGPSPARPPAKPPEDEPDADGYESDDCT-ALGTLDFSLLYDQENNALHCTITKAKGLKPMDHNGLADPYVKLHLLPGASKANKLRTKTLRNTLNPTWNETLTYYGITDEDMIRKTLRISVCDEDKFRHNEFIGETRVPLKKLKPNHTKTFNICLE-----KQLPVDKTEDKSLEERGRILISLKYSSQKQGLLVGIVRCAHLAAMDANGYSDPYVKTYLRPDVDKKSKHKTAVKKKTLNPEFNEEFCYEIKHGDLAKKSLEVTVWDYDIGKSNDFIGGVVLGIHAKGERLKHWFDCLKNKDKRIERWHTLTSELP 406

The following BLAST results are available for this feature:

BLAST of TCONS_00057241-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00057241-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DOC2B	2.730e-86	44.14	Double C2-like domain-containing protein beta OS=H...	[more]

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TCONS_00057241-protein (polypeptide) - C. hemisphaerica