TCONS_00057264-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057264-protein
Unique NameTCONS_00057264-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length406

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057264-protein ID=TCONS_00057264-protein|Name=TCONS_00057264-protein|organism=Clytia hemisphaerica|type=polypeptide|length=406bp
MNISINNNTIDNLNRIGMAILDRNILTTVYVLNVILGVPANSLLLYSLLI
KKRESRRENINGYQFYAFMAIVDLINSSLVPSFHITGVHFKTITYDDYYE
NLCRVILSCNYSLSMLSLWALSLLSIDRCLALVYPFKYHDNDYTKTKFAV
IAIVVCHTMIVIIPASTENYFQYEGQPGLMCGMVFKRLNSVYGVYVGTTQ
LALPSCIIGVSNCIVFRIAIKKLQETRLFKQRIGRLSVKRGKIIEQDAES
SKEKPSTQCWDKQWPDSQNPSILSIKASIEEIKPAILPIHNFSLDAKNIN
EKSQEQVPNDRKKLKIIISTLFLFLNALVCWLPYLLPRFLAFLHIKQFSS
RTFVYTVIGTTYISTLNPYIIFYTRKDLRLFKSESFVTNFNRQRSIKHKT
TDAKNC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036073XLOC_036073Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057264TCONS_00057264Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300350400Expect = 5.1E-24 / Score = 84.8Expect = 1.6E-35 / Score = 121.9Score = Score = Score = 19.007SequencePR00237PF00001PS00237G3DSA:1.20.1070.10SSF81321PS50262
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 110..132
score: 26.37
coord: 25..49
score: 22.57
coord: 316..340
score: 21.4
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 41..370
e-value: 5.1E-24
score: 84.8
IPR000276G protein-coupled receptor, rhodopsin-likePROSITEPS00237G_PROTEIN_RECEP_F1_1coord: 116..132
NoneNo IPR availableGENE3D1.20.1070.10coord: 1..405
e-value: 1.6E-35
score: 121.9
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 11..224
coord: 302..381
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 40..371
score: 19.007

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057264-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
50100150200250300350400Sequence
Match NameE-valueIdentityDescription
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