TCONS_00057325-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057325-protein
Unique NameTCONS_00057325-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length270

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057325-protein ID=TCONS_00057325-protein|Name=TCONS_00057325-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
MAEDGNDYKDSFMKMASSAFTASKTGWTRARQFTEERIGSAEKTVYDAQF
ENLNLRADRTKNITEKLLRQGEAMVQPNPSVRIEEYMYEKLDKKNPPRPT
NAFILGQTMQDASQDIGPGTAYGSALSQCGGTMKKMGNAEKDFMQKSMSH
FLHPLKSFLDNEMKTIMKEKRALEVKRLDLDACKNKVKKSQTPEKMRQAE
SELRAAQSDFDRQQEITRLLLEGVSTAHGNHLTALHSYVEALGTYHQQCQ
SYXCQNLNHCRKSTKAVFRR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036124XLOC_036124Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057325TCONS_00057325Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004148BAR_dom
IPR027267AH/BAR-dom
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 196..216
NoneNo IPR availableGENE3D1.20.1270.60coord: 44..265
e-value: 2.2E-45
score: 154.8
IPR004148BAR domainSMARTSM007215barcoord: 21..263
e-value: 4.0E-50
score: 182.5
IPR004148BAR domainPFAMPF03114BARcoord: 28..251
e-value: 9.4E-58
score: 195.6
IPR004148BAR domainPROSITEPS51021BARcoord: 35..270
score: 25.906
IPR027267Arfaptin homology (AH) domain/BAR domainSUPERFAMILY103657BAR/IMD domain-likecoord: 29..251

Blast
[Close]
BLAST of TCONS_00057325-protein vs. Swiss-Prot (Human)
Match: SHLB1 (Endophilin-B1 OS=Homo sapiens GN=SH3GLB1 PE=1 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.619e-82
Identity = 120/228 (52.63%), Postives = 165/228 (72.37%), Query Frame = 0 
Query:   25 TGWTRARQFTEERIGSAEKTVYDAQFENLNLRADRTKNITEKLLRQGEAMVQPNPSVRIEEYMYEKLDKKNPPRPTNAFILGQTMQDASQDIGPGTAYGSALSQCGGTMKKMGNAEKDFMQKSMSHFLHPLKSFLDNEMKTIMKEKRALEVKRLDLDACKNKVKKSQTPEKMRQAESELRAAQSDFDRQQEITRLLLEGVSTAHGNHLTALHSYVEALGTYHQQCQSY 252
            T  +RA QFTEE++G AEKT  DA  ENL  +A+ TK  TEK+++Q E ++QPNP+ RIEE++YEKLD+K P R  N  +LGQ M DA  + GPGTAYG+AL +CG T K++G A+++ +Q S  +FL PL++F++ + KTI KE++ L+ KRLDLDA K ++KK++  E    +E ELR  QS+FDRQ EITRLLLEG+S+ H +HL  L+ +VEA  TY+ QC  Y
Sbjct:   17 TFLSRAVQFTEEKLGQAEKTELDAHLENLLSKAECTKIWTEKIMKQTEVLLQPNPNARIEEFVYEKLDRKAPSRINNPELLGQYMIDAGTEFGPGTAYGNALIKCGETQKRIGTADRELIQTSALNFLTPLRNFIEGDYKTIAKERKLLQNKRLDLDAAKTRLKKAKAAETRNSSEQELRITQSEFDRQAEITRLLLEGISSTHAHHLRCLNDFVEAQMTYYAQCYQY 244
The following BLAST results are available for this feature:
BLAST of TCONS_00057325-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SHLB16.619e-8252.63Endophilin-B1 OS=Homo sapiens GN=SH3GLB1 PE=1 SV=1[more]
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