TCONS_00057334-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057334-protein
Unique NameTCONS_00057334-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length166

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057334-protein ID=TCONS_00057334-protein|Name=TCONS_00057334-protein|organism=Clytia hemisphaerica|type=polypeptide|length=166bp
MEEVFKSFCSFGAGKDGAALMDNSKFAKLARDLKLLDKKLTATDVDIIFN
RTEVKPKTERKINFKQFKAAVKLLAEKKYPGDADGASKLEELIAAGKPTA
KGATKAVKGGAVDRLTDTSKYTGSHKERFDESGKGKGLDGRREMDKKASE
GYVGGYQGMDTYDKSH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036129XLOC_036129Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057334TCONS_00057334Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008907P25-alpha
IPR011992EF-hand-dom_pair
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 1..102
e-value: 5.3E-19
score: 67.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..166
IPR008907P25-alphaPFAMPF05517p25-alphacoord: 2..158
e-value: 6.0E-57
score: 192.1
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 1..128

Blast
[Close]
BLAST of TCONS_00057334-protein vs. Swiss-Prot (Human)
Match: TPPP2 (Tubulin polymerization-promoting protein family member 2 OS=Homo sapiens GN=TPPP2 PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 6.382e-42
Identity = 83/166 (50.00%), Postives = 106/166 (63.86%), Query Frame = 0 
Query:    2 EEVFKSFCSFGAGKDGAALMDNSKFAKLARDLKLLD-KKLTATDVDIIFNRTEVKPKTERKINFKQFKAAVKLLAEKKYPGDA--DGASKLEELIAAGKPTAKGATKAVKGGAVDRLTDTSKYTGSHKERFDESGKGKGLDGRREMDKKASEGYVGGYQGMDTYDK 164
            E+ F  F +FG        M+N  F+KL +D  ++D K +T+TDVDI+F++  VK K  R I F+QFK AVK L +K++ G +  +    +  L+    P   GATKA   GAVDRLTDTSKYTG+HKERFDESGKGKG+ GR EM      GYV GY+G  TYDK
Sbjct:    6 EKTFHRFAAFGESSSSGTEMNNKNFSKLCKDCGIMDGKTVTSTDVDIVFSK--VKAKNARTITFQQFKEAVKELGQKRFKGKSPDEVLENIYGLMEGKDPATTGATKATTVGAVDRLTDTSKYTGTHKERFDESGKGKGIAGREEMTDNT--GYVSGYKGSGTYDK 167
The following BLAST results are available for this feature:
BLAST of TCONS_00057334-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TPPP26.382e-4250.00Tubulin polymerization-promoting protein family me... [more]
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