TCONS_00057398-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057398-protein
Unique NameTCONS_00057398-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length390

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057398-protein ID=TCONS_00057398-protein|Name=TCONS_00057398-protein|organism=Clytia hemisphaerica|type=polypeptide|length=390bp
INVKCMIKLTLLVETILQRKVVNSSRVNHLEENCKSKMAALYGDMIFNID
NGYLEGLVRGFRSGILTRTDYLNLIQCETLEDLKLHLQSTDYGNFLANEA
GPLTVAIIDEKLREKLVIEFEHLRNQAVEPLATFMDFITYSYMIDNIILL
ITGTLHQRSIAELIPKCHPLGKFPEMASINIASTPAELYNAVLVDTPLAS
FFHDCISEQDLDEMNIEIIRNSLYKSYLEAFSKFCEGLGGVNAEVMRSIL
SFEADRRAIMITLNSFGTELNKDDRAKLFPKCGQLFPDGLARLAKAEDYD
QVRNIADCYGEYRSLFDGTGTNPGDKTLEDKFFEHEVKLNVNSFMQQFHF
GVFYAYVKLKEQECRNIVWISECISQRNKTKVDNYINIFE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036158XLOC_036158Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057398TCONS_00057398Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035067V-type_ATPase_suC
IPR016727ATPase_V0-cplx_dsu
IPR002843ATPase_V0-cplx_csu/dsu
Vocabulary: Molecular Function
TermDefinition
GO:0015078hydrogen ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0015991ATP hydrolysis coupled proton transport
Vocabulary: Cellular Component
TermDefinition
GO:0033179proton-transporting V-type ATPase, V0 domain
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015991 ATP hydrolysis coupled proton transport
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
molecular_function GO:0015078 hydrogen ion transmembrane transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035067V-type ATPase subunit c domainGENE3D1.20.1690.10coord: 42..120
e-value: 0.43
score: 10.7
coord: 130..233
e-value: 3.0E-15
score: 56.1
IPR016727ATPase, V0 complex, subunit dPIRSFPIRSF018497V-ATP_synth_Dcoord: 42..389
e-value: 3.1E-151
score: 501.7
IPR002843ATPase, V0 complex, c/d subunitPFAMPF01992vATP-synt_AC39coord: 54..385
e-value: 1.7E-115
score: 386.0
IPR002843ATPase, V0 complex, c/d subunitSUPERFAMILY103486V-type ATP synthase subunit Ccoord: 52..388

Blast
[Close]
BLAST of TCONS_00057398-protein vs. Swiss-Prot (Human)
Match: VA0D1 (V-type proton ATPase subunit d 1 OS=Homo sapiens GN=ATP6V0D1 PE=1 SV=1)

HSP 1 Score: 580.096 bits (1494), Expect = 0.000e+0
Identity = 259/350 (74.00%), Postives = 316/350 (90.29%), Query Frame = 0 
Query:   40 ALYGDMIFNIDNGYLEGLVRGFRSGILTRTDYLNLIQCETLEDLKLHLQSTDYGNFLANEAGPLTVAIIDEKLREKLVIEFEHLRNQAVEPLATFMDFITYSYMIDNIILLITGTLHQRSIAELIPKCHPLGKFPEMASINIASTPAELYNAVLVDTPLASFFHDCISEQDLDEMNIEIIRNSLYKSYLEAFSKFCEGLGGVNAEVMRSILSFEADRRAIMITLNSFGTELNKDDRAKLFPKCGQLFPDGLARLAKAEDYDQVRNIADCYGEYRSLFDGTGTNPGDKTLEDKFFEHEVKLNVNSFMQQFHFGVFYAYVKLKEQECRNIVWISECISQRNKTKVDNYINIF 389
            + + ++ FN+DNGYLEGLVRG ++G+L++ DYLNL+QCETLEDLKLHLQSTDYGNFLANEA PLTV++ID++L+EK+V+EF H+RN A EPLA+F+DFITYSYMIDN+ILLITGTLHQRSIAEL+PKCHPLG F +M ++NIA TPAELYNA+LVDTPLA+FF DCISEQDLDEMNIEIIRN+LYK+YLE+F KFC  LGG  A+ M  IL FEADRRA +IT+NSFGTEL+K+DRAKLFP CG+L+P+GLA+LA+A+DY+QV+N+AD Y EY+ LF+G G+NPGDKTLED+FFEHEVKLN  +F+ QFHFGVFYA+VKLKEQECRNIVWI+ECI+QR++ K+DNYI IF
Sbjct:    2 SFFPELYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLTVSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFCTLLGGTTADAMCPILEFEADRRAFIITINSFGTELSKEDRAKLFPHCGRLYPEGLAQLARADDYEQVKNVADYYPEYKLLFEGAGSNPGDKTLEDRFFEHEVKLNKLAFLNQFHFGVFYAFVKLKEQECRNIVWIAECIAQRHRAKIDNYIPIF 351
The following BLAST results are available for this feature:
BLAST of TCONS_00057398-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VA0D10.000e+074.00V-type proton ATPase subunit d 1 OS=Homo sapiens G... [more]
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