TCONS_00057451-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057451-protein
Unique NameTCONS_00057451-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length472

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057451-protein ID=TCONS_00057451-protein|Name=TCONS_00057451-protein|organism=Clytia hemisphaerica|type=polypeptide|length=472bp
MRQQFVIGVISLIVFLYVVEVTFFSSPKIARQKVIKHDRFWYRKRLYAHM
ASINNKKMMERFTDLHLSSEQAILDAMEEELKELESFGIDVDDFEERPIP
GALKRVKLPATHISMVGDDAEVHRQRDAHDKEESLNPEPITEATKRDNDL
VTDESEGNFTRELSRRFRVRDPDPDDLQKLTKKGIDFERETDPLAESTYC
EKEVFLTILVISQPKSVERRRFIRDTWARSYQEDFRKLKGKQPFPNGKTY
STSDVVRVVFVVGQSAQTDTKVMQSVKEESRMNKDIVFGSMMENYRNLTT
KTKLGLKWAFYECKTSYVLKTDDDVFVNPVVLVEWLKEIPKTNLYTGWCN
FNSPVVRDKRNKWYISYEDYKEEKYPGYCLGGGYLISSDVLASVIKLSYG
RFLFPMEDLYVGLMIRELDGVQPRDERKHFNLVYNGKTENSCDLNSIFLL
HRVLGQNLVKHINQSRNALENC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036208XLOC_036208Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057451TCONS_00057451Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002659Glyco_trans_31
IPR029044Nucleotide-diphossugar_trans
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0008378galactosyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
cellular_component GO:0016020 membrane
molecular_function GO:0008378 galactosyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 67..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..144
IPR002659Glycosyl transferase, family 31PFAMPF01762Galactosyl_Tcoord: 218..419
e-value: 5.2E-43
score: 147.0
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 306..415

Blast
[Close]
BLAST of TCONS_00057451-protein vs. Swiss-Prot (Human)
Match: B3GT2 (Beta-1,3-galactosyltransferase 2 OS=Homo sapiens GN=B3GALT2 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.131e-33
Identity = 86/283 (30.39%), Postives = 142/283 (50.18%), Query Frame = 0 
Query:  201 EKEVFLTILVISQPKSVERRRFIRDTWARSYQEDFRKLKGKQPFPNGKTYSTSDVVRVVFVVGQSAQTDTKVMQSVKEESRMNKDIVFGSMMENYRNLTTKTKLGLKWAFYEC-KTSYVLKTDDDVFVNPVVLVEWLKEI---PKTNLYTGWCNFNSPVVRDKRNKWYISYEDYKEEKYPGYCLGGGYLISSDVLASVIKLSYGRFLFPMEDLYVGLMIREL--DGVQPRDE--RKHFNLVYNGKTENSCDLNSIFLLHRVLGQNLVK---HINQSR-NALEN 471
            EK  FL +L+ ++P  +E RR IR TW                    ++ +    +  +F++G S + +  + +++ EESR   DI+    ++ Y NLT KT +G+ W    C    YV+KTD D+FVN   L+  L +    P+ N +TG+        R+K +KWY+  + Y  E+YP +C G GY+ S D+   + K+S G     +ED+YVG+ + +L  D V P +E    H+ + Y     +SC  + +   H+     L+K   H+ Q++ NA  N
Sbjct:  148 EKSPFLILLIAAEPGQIEARRAIRQTWG------------------NESLAPGIQITRIFLLGLSIKLNGYLQRAILEESRQYHDIIQQEYLDTYYNLTIKTLMGMNWVATYCPHIPYVMKTDSDMFVNTEYLINKLLKPDLPPRHNYFTGYLMRGYAPNRNKDSKWYMPPDLYPSERYPVFCSGTGYVFSGDLAEKIFKVSLGIRRLHLEDVYVGICLAKLRIDPVPPPNEFVFNHWRVSY-----SSCKYSHLITSHQFQPSELIKYWNHLQQNKHNACAN 407
The following BLAST results are available for this feature:
BLAST of TCONS_00057451-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
B3GT22.131e-3330.39Beta-1,3-galactosyltransferase 2 OS=Homo sapiens G... [more]
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