Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00057637-protein ID=TCONS_00057637-protein|Name=TCONS_00057637-protein|organism=Clytia hemisphaerica|type=polypeptide|length=153bp MGGGYKFSDEEKRQLQKIFNDADDDSSGSIDKKEFKKLSKKLNIFPGEKE FESMFREVDADGSGEIDFDEFMTLLKKILAPPSDEELLMKFKKLDQGNKG YLTFKDLKAGFQAMNYQISDSAIKDMIAVASDDGDDQVSIEEFTAVAKRP RKL Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term Definition
GO:0005509 calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
molecular_function
GO:0005509
calcium ion binding
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
M G G G Y K F S D E E K R Q L Q K I F N D A D D D S S G S I D K K E F K K L S K K L N I F P G E K E F E S M F R E V D A D G S G E I D F D E F M T L L K K I L A P P S D E E L L M K F K K L D Q G N K G Y L T F K D L K A G F Q A M N Y Q I S D S A I K D M I A V A S D D G D D Q V S I E E F T A V A K R P R K L 20 40 60 80 100 120 140 Expect = 1.8E-4 / Score = 30.8 Expect = 2.1E-8 / Score = 43.9 Expect = 1.2 / Score = 17.2 Expect = 5.7 / Score = 11.7 Expect = 3.4E-13 / Score = 49.0 Expect = 0.0021 / Score = 17.7 Score = 7.261 Score = 9.855 Score = 12.226 Score = 15.657 Expect = 1.12513E-9 / Score = 49.8537 Expect = 2.2901E-10 / Score = 51.7797 Expect = 2.69594E-7 / Score = 43.3053 Expect = 4.4E-14 / Score = 51.5 Expect = 6.4E-18 / Score = 64.1 Expect = 1.6E-11 / Score = 43.7 Score = Score = Score = Sequence SM00054 PF13833 PS50222 PS50222 PS50222 PS50222 cd00051 cd00051 cd00051 G3DSA:1.10.238.10 G3DSA:1.10.238.10 G3DSA:1.10.238.10 PS00018 PS00018 SSF47473
Blast
BLAST of TCONS_00057637-protein vs. Swiss-Prot (Human)
Match:
CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)
HSP 1 Score: 83.1889 bits (204), Expect = 4.628e-21
Identity = 47/140 (33.57%), Postives = 80/140 (57.14%), Query Frame = 0
Query: 6 KFSDEEKRQLQKIFNDADDDSSGSIDKKEFKKLSKKLNIFPGEKEFESMFREVDADGSGEIDFDEFMTLL-KKILAPPSDEELLMKFKKLDQGNKGYLTFKDLKAGFQAMNYQISDSAIKDMIAVASDDGDDQVSIEEFT 144
+ ++E+ + ++ F+ D D G+I KE + + L P E E + M EVDADG+G IDF EF+T++ +K+ S+EE+ F+ D+ GY++ +L+ + +++D + +MI A DGD QV+ EEF
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143
The following BLAST results are available for this feature:
BLAST of TCONS_00057637-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M G G G Y K F S D E E K R Q L Q K I F N D A D D D S S G S I D K K E F K K L S K K L N I F P G E K E F E S M F R E V D A D G S G E I D F D E F M T L L K K I L A P P S D E E L L M K F K K L D Q G N K G Y L T F K D L K A G F Q A M N Y Q I S D S A I K D M I A V A S D D G D D Q V S I E E F T A V A K R P R K L 20 40 60 80 100 120 140 Expect = 4.63e-21 / Id = 33.57 Sequence CALM3
Match Name E-value Identity Description
CALM3 4.628e-21 33.57 Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1 [more]
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