TCONS_00057642-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057642-protein
Unique NameTCONS_00057642-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length299

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057642-protein ID=TCONS_00057642-protein|Name=TCONS_00057642-protein|organism=Clytia hemisphaerica|type=polypeptide|length=299bp
VRINGKFSDEFDVNVGVHQGSVLSPLLFIIVMEALSRSFRTGCPWEFPCA
DDLAIIAESKKELLFKLTQWIQAIESKGLRVNTQKTKVMHCKHGLRERQK
TSKWPCGVCYKGVGSNSILCRQCKNYIHKRCSGIKGRLREDFNYVCPACL
NPVVVPPSPVFSVDGSDLEVVPTFCYLGDMIGDNGGCFDAITSRVKSAWN
KFRQLLPILTNKSIPLQCRGRVFTSAVRGVLLHGSPTWAVTVDDCSRLVR
YDNAMVRWICSTRLAHRISMTQLRERLGIPCIEDLVSQGRLRWFGHVQR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036357XLOC_036357Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057642TCONS_00057642Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR000477RT_dom
IPR011011Znf_FYVE_PHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 105..150
e-value: 0.0012
score: 28.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 96..153
e-value: 5.0E-8
score: 32.2
NoneNo IPR availableGENE3D3.30.70.270coord: 1..95
e-value: 1.9E-16
score: 59.7
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 19..88
coord: 170..201
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 1..99
e-value: 2.0E-14
score: 53.6
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..110
score: 12.114
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 102..158

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057642-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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