TCONS_00057988-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057988-protein
Unique NameTCONS_00057988-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length736

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057988-protein ID=TCONS_00057988-protein|Name=TCONS_00057988-protein|organism=Clytia hemisphaerica|type=polypeptide|length=736bp
FLDGVEEIHQSQMVQDILQTGAICCLVCIETVKRLNAIWSCTKCFSIFHL
QCIQKWAREGIGRQAIQAEGDLRDVKFMWNCPKCRHEYSQNENPTKYMCY
CGKEEDPPFDPWIVPHSCGNKCERLLQPECGHECLLLCHPGACPPCPKTI
KSKCYCGKSSPVLKRCSQKFWSCGNVCGQKLPCGQHVCEQVCHSGECPPC
PKTSEKKCMCGKKKAIRKCAENVWSCQQACNKALSCDHHVCEKECHSEDC
GDCPRGGNRFCPCGKTEIQLPCTEDVNTCVDTCMKPLNCQLHKCSKKCHF
GSCESCLQVVEKSCRCGKKKKLVPCSQPLSCESKCTKTRNCGRHPCKKKC
CNGSCPPCEQVCNRNLNCRNHKCPSPCHQGLCYPCPESKKVTCFCGSNSI
TTPCGKEKSVKPPRCKKQCTIPSDCHHEKRENHRCHFGRCPPCKKACGKV
FECGHSCPDLCHDQVRDKDAENRNLLRGINGKRGNKEIYVALPCQPCRAP
VKKLCLGEHDFREFPCSEVVEYACQTPCGRRLACGNHTCTKKCHLVKGKP
EQGKAGSNCEKCKEMCRKERPTGCVHDCKLPCHPGDCPPCETHLKMFCHC
KALQVYLKCWEFHEGDEKRQEEMLCCTVRCQRIISCGHACSKICHEGPCS
LANECQEKKKVKCKCGRKKKDLPCIEVDEDTQIDCDDKCKEIKAKKNMSK
QQEEKERRDAELRAQQEELEKFERKKQGRKRKAKQX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036544XLOC_036544Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057988TCONS_00057988Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000967Znf_NFX1
IPR019786Zinc_finger_PHD-type_CS
IPR000197Znf_TAZ
IPR001841Znf_RING
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003712transcription cofactor activity
GO:0004402histone acetyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0004402 histone acetyltransferase activity
molecular_function GO:0003712 transcription cofactor activity
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 693..732
NoneNo IPR availableCDDcd06008NF-X1-zinc-fingercoord: 279..327
e-value: 2.20731E-8
score: 50.4216
NoneNo IPR availableCDDcd06008NF-X1-zinc-fingercoord: 331..379
e-value: 1.08939E-5
score: 42.7176
NoneNo IPR availableCDDcd06008NF-X1-zinc-fingercoord: 226..274
e-value: 1.00342E-6
score: 45.7992
NoneNo IPR availableCDDcd06008NF-X1-zinc-fingercoord: 173..221
e-value: 7.72054E-10
score: 54.6588
NoneNo IPR availableCDDcd06008NF-X1-zinc-fingercoord: 358..406
e-value: 1.52202E-8
score: 50.8068
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 14..91
IPR000967Zinc finger, NF-X1-typeSMARTSM00438znfxneu3coord: 636..665
e-value: 5.2
score: 15.6
coord: 534..564
e-value: 5.6
score: 15.3
coord: 130..148
e-value: 0.037
score: 23.2
coord: 289..308
e-value: 0.0022
score: 27.3
coord: 574..592
e-value: 0.24
score: 20.5
coord: 183..202
e-value: 1.9E-4
score: 30.8
coord: 236..255
e-value: 0.11
score: 21.6
coord: 453..499
e-value: 64.0
score: 5.8
coord: 368..387
e-value: 0.095
score: 21.8
coord: 341..360
e-value: 0.043
score: 23.0
IPR000967Zinc finger, NF-X1-typePFAMPF01422zf-NF-X1coord: 576..590
e-value: 0.031
score: 14.2
coord: 236..254
e-value: 130.0
score: 2.7
coord: 453..463
e-value: 1.8
score: 8.6
coord: 368..386
e-value: 0.015
score: 15.2
coord: 130..147
e-value: 0.0031
score: 17.4
coord: 341..358
e-value: 0.023
score: 14.6
coord: 636..650
e-value: 0.0036
score: 17.2
coord: 534..544
e-value: 0.022
score: 14.7
coord: 434..444
e-value: 3.5
score: 7.7
coord: 291..306
e-value: 0.021
score: 14.8
coord: 183..201
e-value: 1.5E-5
score: 24.9
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 25..84
IPR000197Zinc finger, TAZ-typePROSITEPS50134ZF_TAZcoord: 269..385
score: 8.605
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 25..85
score: 9.037

Blast
[Close]
BLAST of TCONS_00057988-protein vs. Swiss-Prot (Human)
Match: NFXL1 (NF-X1-type zinc finger protein NFXL1 OS=Homo sapiens GN=NFXL1 PE=1 SV=2)

HSP 1 Score: 678.322 bits (1749), Expect = 0.000e+0
Identity = 368/726 (50.69%), Postives = 464/726 (63.91%), Query Frame = 0 
Query:    3 DGVEEIHQSQMVQDILQTGAICCLVCIETVKRLNAIWSCTKCFSIFHLQCIQKWAREGIGRQAIQAEGDLRDVKFMWNCPKCRHEYSQNENPTKYMCYCGKEEDPPFDPWIVPHSCGNKCERLLQPECGHECLLLCHPGACPPCPKTIKSKCYCGKSSPVLKRCSQKFWSCGNVCGQKLPCGQHVCEQVCHSGECPPCPKTSEKKCMCGKKKAIRKCAENVWSCQQACNKALSCDHHVCEKECHSEDCGDCPRGGNRFCPCGKTEIQLPCTEDVNTCVDTCMKPLNCQLHKCSKKCHFGSCESCLQVVEKSCRCGKKKKLVPCSQPLSCESKCTKTRNCGRHPCKKKCCNGSCPPCEQVCNRNLNCRNHKCPSPCHQGLCYPCPESKKVTCFCGSNSITTPCGKEKSVKPPRCKKQCTIPSDCHHEKRENHRCHFGRCPPCKKACGKVFE-CGHSCPDLCHDQVRDKDAENRNLLRGINGKRGNKEIYVALPCQPCRAPVKKLCLGEHDFREFPCSEVVEYACQTPCGRRLACGNHTCTKKCHLVK---GKPEQGKAGSNCEKCKEMCRKERPTGCVHDCKLPCHPGDCPPCETHLKMFCHCKALQVYLKCWEFHEGDEKRQEEMLCCTVRCQRIISCGHACSKICHEGPCSLANECQEKKKVKCKCGRKKKDLPCIEVDED-TQIDCDDKCKEIKAKKNMSKQQEEKERRDAELRAQQEELEKFE 723
            D  E     Q V +  Q GA+ CL+CI +VKR  A+WSC+ CF IFH+ CIQKWA++     +   + D       W CPKCR EY ++E P++Y CYCGK EDPP DPW+VPHSCG  CER  +P CGH+CLLLCHPG CPPCPK + + CYC K+ P+ +RCS K WSC   CGQKL CGQH CE  CH+G C PCP+ S +KC+CGKK A R CA  +W C Q C K L C +H CE+ CH   CG+CPR G RFCPC K++  LPCTEDV TC D+C K L C +H+CS++CH G CE+C Q VEK CRCGK  K +PC +P  CE+KC K R+C +H C++KCC G+CPPC+Q C R L CRNHKCPS CH+G CYPCPE+  V C CG+  +T PCG+E++ +PP+CK+QC+ P  CHH  +E HRCHFG CPPC + C KV E CGH CP  CHDQ   K                   I  ALPC PC+ P+   CLG+H+    PC  V  Y+C+  CGR L C NHTC K+CH V    G   + KAG  C  C+E C K RP GC+H C L CHPG+CPPC   L++ CHCK   +Y++C +    D   +  + CC  +C + + CGH C ++CH G C     C +K K++C C R KK+L C +V E+   I+CD  CKE+K K +  K+ E K   + E R QQ ELE FE
Sbjct:  138 DTRELERTKQYVNEAFQAGAMTCLICIASVKRNQAVWSCSGCFCIFHMPCIQKWAKDSQFLVSSVTDDDFGKKDCPWPCPKCRFEYKRSETPSRYYCYCGKVEDPPLDPWLVPHSCGQVCEREFKPPCGHKCLLLCHPGPCPPCPKMVTTTCYCKKAKPIPRRCSAKEWSCQLPCGQKLLCGQHKCENPCHAGSCQPCPRVSRQKCVCGKKVAERSCASPLWHCDQVCGKTLPCGNHTCEQVCHVGACGECPRSGKRFCPCQKSKFSLPCTEDVPTCGDSCDKVLECGIHRCSQRCHRGPCETCRQEVEKHCRCGKHTKRMPCHKPYLCETKCVKMRDCQKHQCRRKCCPGNCPPCDQNCGRTLGCRNHKCPSVCHRGSCYPCPETVDVKCNCGNTKVTVPCGRERTTRPPKCKEQCSRPPTCHHTSQEKHRCHFGSCPPCHQPCQKVLEKCGHLCPAPCHDQALIKQTGRHQPTGPWEQPSEPAFIQTALPCPPCQVPIPMECLGKHEVSPLPCHAVGPYSCKRVCGRILDCQNHTCMKECHKVTKTDGCTGKNKAGPECLHCEEGCSKSRPLGCLHPCILRCHPGECPPCVQMLRIKCHCKITSLYVECRKITTADVNEKNLLSCCKNQCPKELPCGHRCKEMCHPGECPF--NCNQKVKLRCPCKRIKKELQCNKVRENQVSIECDTTCKEMKRKASEIKEAEAKAALEEEKRRQQAELEAFE 861
The following BLAST results are available for this feature:
BLAST of TCONS_00057988-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NFXL10.000e+050.69NF-X1-type zinc finger protein NFXL1 OS=Homo sapie... [more]
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