TCONS_00058024-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058024-protein
Unique NameTCONS_00058024-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length417

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058024-protein ID=TCONS_00058024-protein|Name=TCONS_00058024-protein|organism=Clytia hemisphaerica|type=polypeptide|length=417bp
MSGRRSFYLDSNSVCSAEEDENEGLTTGEPVSFMCLPCSISASCVSSNNY
TTASLTFSKVVLTAEETRVYQIPWEKQQKKIQKNKHRSLCFCWCCVCTCL
CKPVNNRLSRRVSMSNHDLKRRTACYKNLVEQQKPSVEQIQKWSISFEDL
LFNELGRKLFYLFLQQEHSEENLQFWSEVNGLKDISDCKEKVSRMRSIYK
EFIKPMALKEVNIAGNTRRQIEDLMETKPNEKMFDSAQHQVFLMMHRQSY
PRFLQSEMFHSILQTTYAYNPNSPKPPLTISNTTPRSIGENDTTENAIET
QPQSGSTHLRQSPTTSSDLTLTNPHPSTTNTKQRPKLDNQSADNRNSRSF
VSPNQLSPASLHENLTARAEEDDKGVEDSRNTQLDRHHSMPSSQKGQHQK
QKLKFDNKLGPRNSSNT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036578XLOC_036578Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058024TCONS_00058024Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016137RGS
IPR024066RGS_subdom1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016137RGS domainPRINTSPR01301RGSPROTEINcoord: 194..217
score: 35.96
coord: 237..256
score: 48.59
coord: 143..164
score: 40.32
coord: 165..183
score: 43.48
IPR016137RGS domainSMARTSM00315RGS_3coord: 146..263
e-value: 6.2E-35
score: 132.0
IPR016137RGS domainPFAMPF00615RGScoord: 146..261
e-value: 1.5E-29
score: 102.5
IPR016137RGS domainPROSITEPS50132RGScoord: 146..263
score: 32.671
IPR016137RGS domainSUPERFAMILY48097Regulator of G-protein signaling, RGScoord: 133..265
IPR024066RGS, subdomain 1GENE3D1.10.196.10coord: 130..171
e-value: 1.7E-9
score: 37.1
NoneNo IPR availableGENE3D1.10.167.10coord: 172..248
e-value: 7.6E-19
score: 67.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 269..417

Blast
[Close]
BLAST of TCONS_00058024-protein vs. Swiss-Prot (Human)
Match: RGS13 (Regulator of G-protein signaling 13 OS=Homo sapiens GN=RGS13 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 9.783e-27
Identity = 49/130 (37.69%), Postives = 85/130 (65.38%), Query Frame = 0 
Query:  136 SVEQIQKWSISFEDLLFNELGRKLFYLFLQQEHSEENLQFWSEVNGLKDISDCKEKVSRMRSIYKEFIKPMALKEVNIAGNTRRQIEDLMETKPNEKMFDSAQHQVFLMMHRQSYPRFLQSEMFHSILQT 265
            ++E++ +W+ SFE+L+  + G  ++  +L+ EHS+EN+QFW      K I+    ++SR + +YK +I+P + +E+NI  +TR  I   ++ +P E  F+ AQ  V++ M R SYPRFL+SEM+  +L+T
Sbjct:   24 TLEEVLQWAQSFENLMATKYGPVVYAAYLKMEHSDENIQFWMACETYKKIASRWSRISRAKKLYKIYIQPQSPREINIDSSTRETIIRNIQ-EPTETCFEEAQKIVYMHMERDSYPRFLKSEMYQKLLKT 152
The following BLAST results are available for this feature:
BLAST of TCONS_00058024-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RGS139.783e-2737.69Regulator of G-protein signaling 13 OS=Homo sapien... [more]
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