TCONS_00058075-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058075-protein
Unique NameTCONS_00058075-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length668

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058075-protein ID=TCONS_00058075-protein|Name=TCONS_00058075-protein|organism=Clytia hemisphaerica|type=polypeptide|length=668bp
MELRLKNVLMLLVPSSILSFTYFWWWQKRIKAPEKEDKTLKPEVVEEPIV
TFKDIEEELVEEILDNADTFDDSLSLHEFNHGSVKRKREHSSCDADSAYV
EDFSSDNVSITGSDTNSNKTTSNPDTTNACDYIQPDEVIEAPVYEEIIAP
EVSESVESAPSNNFRDWFSPAPVIITEDENHNKPACEDKISSEVCQNVES
APDNNFQDWFNSGYESDKEEKDRIEIHWGSQPVSDFEADTENQTVKDYVG
GVAIENLSIVLEREYNERKAKNLKKTEKVKSTPKKSPRSPKKSPRTPKTP
KSADSRFPPKSPKHKKTPKRKDREMEKPWRNEPEKVESPEDGSDSEVFPL
YPNDFVVMEYTVAEDLCGKIIGKHGKAVKDINEKTGAFVCIEAEKVGPKC
VLSIAGLYCQVQDAEKALMTKHKNALKRHVSQWPANNEVQNSILPSDDYV
SVIVTAVINAGNLFVQVFNSDVDSNLIQLQKDLDIAYNQPPQRLMYHESR
KPTIGEICISFIDNMWCRVRVVEHSSESQVVVVFVDYGGSVVIDWHLLYK
IRDPFLELPAQAIQCYITDSYPLPNQADYSYSANLTLNQMIEGKVLHAYV
HGSCNDIPCVELFYTNEETNEDVSVNGNLVNWGLVSAYAPIIIDDSQMIE
VNAVVPQEVSPAPLTVEQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036597XLOC_036597Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058075TCONS_00058075Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002999Tudor
IPR004087KH_dom
IPR004088KH_dom_type_1
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002999Tudor domainSMARTSM00333TUDOR_7coord: 500..556
e-value: 1.7E-8
score: 44.2
IPR002999Tudor domainPFAMPF00567TUDORcoord: 445..567
e-value: 1.3E-20
score: 73.6
IPR002999Tudor domainPROSITEPS50304TUDORcoord: 501..558
score: 10.523
IPR004087K Homology domainSMARTSM00322kh_6coord: 354..423
e-value: 7.1E-7
score: 38.9
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 359..419
e-value: 5.4E-8
score: 32.4
IPR004088K Homology domain, type 1GENE3D3.30.1370.10coord: 356..421
e-value: 5.4E-9
score: 35.1
IPR004088K Homology domain, type 1SUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 352..425
NoneNo IPR availableGENE3D2.40.50.90coord: 540..639
e-value: 1.6E-18
score: 66.4
NoneNo IPR availableGENE3D2.30.30.140coord: 499..539
e-value: 3.2E-10
score: 39.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 271..346
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 355..418
score: 12.223
NoneNo IPR availableCDDcd00105KH-Icoord: 357..419
e-value: 1.56051E-7
score: 47.9399
NoneNo IPR availableCDDcd04508TUDORcoord: 505..550
e-value: 1.63093E-7
score: 47.9779
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 475..568

Blast
[Close]
BLAST of TCONS_00058075-protein vs. Swiss-Prot (Human)
Match: AKAP1 (A-kinase anchor protein 1, mitochondrial OS=Homo sapiens GN=AKAP1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.683e-17
Identity = 81/296 (27.36%), Postives = 129/296 (43.58%), Query Frame = 0 
Query:  354 DFVVMEYTVAEDLCGKIIGKHGKAVKDINEKTGAFVCIEAEKVGPKC-VLSIAGLYCQVQDAEKALMTKHKNALKRHVSQWPANNEVQNSI-------LPSDDYVSVIVTAVINAGNLFVQVFNSDVDSNLIQLQKDLDIAYNQPPQRLMYHESRKPT---IGEICIS-FIDNMWCRVRVVEHSSES-QVVVVFVDYGGSVVIDWHLLYKIRDPFLELPAQAIQCYITDSYPLPNQADYSYSANLTLNQMIEGKVLHAYVHG-SCNDIPCVELFYTNEETNEDVSVNGNLVNWGLV 635
            D ++ E  V + L G++IGK G+ V  + + +GA + I          +  I G    V  A   +  K K     ++   P  +    S+       LP    V VIV   +NAG+LFVQ         L  L + + + Y+QP    +      PT   I  IC +   D  W R +VV    E+ +V + +VDYGG   +   +L +IR  F+ LP Q  +  +    PL +   +S  A+  +++M     L A V   S   +P ++L+      +E V +N +LV  GL 
Sbjct:  606 DLIIWEIEVPKHLVGRLIGKQGRYVSFLKQTSGAKIYISTLPYTQSVQICHIEGSQHHVDKALNLIGKKFKELNLTNIYAPPLPSLALPSLPMTSWLMLPDGITVEVIVVNQVNAGHLFVQQHTHPTFHALRSLDQQMYLCYSQPGIPTL------PTPVEITVICAAPGADGAWWRAQVVASYEETNEVEIRYVDYGGYKRVKVDVLRQIRSDFVTLPFQGAEVLLDSVMPLSDDDQFSPEADAAMSEMTGNTALLAQVTSYSPTGLPLIQLWSVV--GDEVVLINRSLVERGLA 893
The following BLAST results are available for this feature:
BLAST of TCONS_00058075-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AKAP15.683e-1727.36A-kinase anchor protein 1, mitochondrial OS=Homo s... [more]
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