TCONS_00058085-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058085-protein
Unique NameTCONS_00058085-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1918

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058085-protein ID=TCONS_00058085-protein|Name=TCONS_00058085-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1918bp
MDSFITLLCGLVLVLYIPIVVDAQEDFNILNPPTCEHLGDFCEGRGKLTP
FEIDVEAKTGTVVGTVQASLNNQNAQYSIIDVRLLDEKDTYSKPRWYNTA
IHVSRDDCSENTLESYTSYRKMFCIDHIRGTIFTTKYFNLPNKQKLNFYM
HFRAQQILKTEYPEVAPIPIKVTSVCDLMYSLRSELQKCNNDTVMITNDK
DANNPKDSLVYRFETFKTDHYLTQLNIDFNQLPRKSPPEIEDGHPLKLWV
KINGQEPEEIDMLYREKKTEAAYLSYPVKVDSQTTIEVKLHTVYIESGDF
KSSRSLREKVVTLVLLESRDYCTNNTYCVLLAQKYMNDARQLQARCVNID
ELSFGPKYGFCPGNSTVPKKQKFVFQYDSVKDSRTPTLVATDYLPFHNGG
NDYVIKIKDIVSNMHYNKYKVLTSTGHEDCTEHYSTGYLPRLFFCINESN
GKIYNTKLIDRISPDERFEITLNITRKKEAFPHFQFTTLMKLSLRISSLC
TRPYSLYRTLSMQCQVPCAYIAHLVPTQKDHSLMHSYNVTVQISRATYPS
NLNCPRNGVSGQKYFISHLIRTSKAPTPNPSELGDFVRFWLKTDYQKTQA
SYFLRLEQAGFTNRIIYTEGMHFVFSATRYYHKTQKEVEYNFDWAKWGVF
LIPFKDYCLTGEPKCKNAFKEYDLYTQTLSYSKSPETNFKVMCGDPDMHG
LRTLYGNCGSYPRPSILKTEYLLERSGGAYSQVEVIPGQAAMYATLSYPM
KYELLSVTAANNKTFDTVDGRDIKSPEGCTQSSLPITAPLSFFCINENTG
RIYTTSAIADQLNSDVEFRFEVRISNTTIYPIRDQTVDLVLTSIDPCKTT
RPDYEELNKCVNYSSKPLTNSTGNSYHFEMPTNYQRIVALKVPLSNLRMQ
SNVANKLNVSTFIQGYNSDGNVTFKYNSPYQIYYTEDVSLVINAPVSFVG
GGVKSLKITLIEGGSETEIEIIKPTNQSDVSLLYINNFACTADCKARFES
WKSKVAELPSNCQFDRMFYNRNFDVCTAERPTFPDELYFNTDELIVDAQV
LIKNCSYISPYTYSTSFWIKDDKKIDSTIVMSRKRRSMDPDALPNLPRYN
VDDLVIRKLSLADQGTYKCGVRDGDEKQREYLSNSIFLGLKDIAKTDVKI
TLVDTENQVQPNTLADKLKDIINGDRESPNLNLQVEFRDVTRGGFATFEF
RIIYAGTRAVRERFCTEINSSNLRNGLSTEYNVLSFDITHQSCCIAVTEG
DVNFRGVYSFPFTLTGHSVSFKCQYGRMDGTEELVFRSCRSNTVGTSAWE
KFDISACRPKTVTSEKLIELQTVENTEDALIVSRNLSAIVNEGNLTSRFD
VEIVTDILKVVVAQNASSTEVAENVIATVDGVLDTDEEILIESNEQMSTS
SNILSQLDTLALNQPATENATVIQRRNIGFGILRPDSTTPILIKSLTDSN
SNSTQFSITQTNETPDETVDASIILPAEVVGKATNRPIYSYLFKKPSFFL
SKNGNLFIQSMVLSASVGDVTIRNLTDPVKLGFQTKKPNVTGLVNTCKFY
DMEKQDWSTEGCRTIRKFGSDEVKCECDHLTNFAILLDVSQTGANPLALQ
IITWIGCGISLAGLFLTIVTYMAFAKLRRKLPPKILINLSVSLSAVLIIF
LVGAEKTEPRIGCQVVAGLLHYFILTTFCWMAIEALNLYRNFVKVFSGGA
SNFRFMVKCSIFSWGLPAVVVIITAVSKPDHLGPADETHAQFCVVRGIPF
FAAVLLPVVLVLLGNMIVLVLVLRAIKDGSQLVKDSKAAKNKKMTQARIA
FACSVLLGLTWVFAILAIGELRDFFQWLFCIFNSLQGFFIFIFYTLRSTE
VRREWKRFFGFGSMERTSTGSSSKYNSKYISIYRLTHVSSLVSRKKSQSS
SINNNDDDKQSIKNKNAK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036603XLOC_036603Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058085TCONS_00058085Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000832GPCR_2_secretin-like
IPR000203GPS
IPR013783Ig-like_fold
IPR007110Ig-like_dom
IPR017981GPCR_2-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO:0004888transmembrane signaling receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO:0007166cell surface receptor signaling pathway
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
molecular_function GO:0004888 transmembrane signaling receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1902..1918
NoneNo IPR availableGENE3D2.60.40.60coord: 47..544
e-value: 0.019
score: 15.1
NoneNo IPR availableGENE3D1.20.1070.10coord: 1588..1884
e-value: 1.6E-38
score: 131.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1896..1918
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 1580..1874
IPR000832GPCR, family 2, secretin-likePRINTSPR00249GPCRSECRETINcoord: 1752..1777
score: 21.9
coord: 1665..1688
score: 30.93
coord: 1601..1625
score: 25.36
coord: 1826..1847
score: 27.43
IPR000832GPCR, family 2, secretin-likePFAMPF000027tm_2coord: 1598..1840
e-value: 6.5E-37
score: 127.0
IPR000203GPS motifSMARTSM00303GPS_3coord: 1543..1592
e-value: 6.9E-11
score: 52.2
IPR000203GPS motifPFAMPF01825GPScoord: 1546..1586
e-value: 4.8E-12
score: 46.3
IPR000203GPS motifPROSITEPS50221GPScoord: 1544..1592
score: 13.185
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1047..1141
e-value: 3.4E-5
score: 23.5
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 1031..1133
score: 7.776
IPR017981GPCR, family 2-likePROSITEPS50261G_PROTEIN_RECEP_F2_4coord: 1599..1848
score: 28.803

Blast
[Close]
BLAST of TCONS_00058085-protein vs. Swiss-Prot (Human)
Match: AGRG4 (Adhesion G-protein coupled receptor G4 OS=Homo sapiens GN=ADGRG4 PE=2 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 1.130e-61
Identity = 193/647 (29.83%), Postives = 319/647 (49.30%), Query Frame = 0 
Query: 1249 EGDVNFRGVYSFPFTLTGHSVSFKCQYGRMDGTEELVFRSCRSNTVGTSAWEKFDISACRPKTVTSEKLIELQTV----ENTEDALIVSRNLSAIVNEGNLTSRFDVEIVTDILKVVVAQNASSTEVAENVIATVDGVLDTDEEILIESNEQMSTSSNILSQLDTLALNQPATENATVIQRRNIGFGILRPDSTTPILIKSLTDSNSNSTQFSITQTNETPDETVDASIILPAEVVGKATNRPIYSYLFK---KPSFFLSKNGNLFIQSMVLSASVGD-VTIRNLTDPVKLGFQTKKPNVT-GLVNTCKFYDMEKQD----WSTEGCRTIRKFGSDEVKCECDHLTNFAILLDVSQT---GANPLALQIITWIGCGISLAGLFLTIVTYMAFAKLRRKLPPKILINLSVSLSAVLIIFLVGAEKTE-PRIG-CQVVAGLLHYFILTTFCWMAIEALNLYRNFVKVFSGGASNFRFMVKCSIFSWGLPAVVVIITAVSKPDHLGPADETHAQFCVVRGIP-FFAAVLLPVVLVLLGNMIVLVLVLRAIKDGSQLVKDSKAAKNKKMT--QARIAFACSVLLGLTWVFAILAIGELRDFFQWLFCIFNSLQGFFIFIFYTLRSTEVRREWKRFF--GFGSMERTSTGSS 1872
            E    ++G Y +  T    +   +C     DG     F S   NT G S WEK     C+      +K+++L  +    EN ED   V+ ++  ++NE     + + +I+   +  +   +  S  +   ++  ++ VL+       + +E    S+ IL  ++        +     +    +   +LR D T   +  S+  S    T   I   N  P   + ASI LP  +  +     + + LF    + S F +KN    + + V+SAS+ D + I+NL DPV +  Q    N   G V+ C F+D E  +    W++ GC+ +++   +   C+CDHLT+F +L+D+S++     N   L +IT+ GCGIS   L + +VTY+AF KLR+  P KILINL  +L  + ++FL+ +  +   ++G C   A  LHYF+L +F WM +EA+++Y   VKVF+    N+  ++K  +  WG+PA++V IT   K D  G    T   FC ++    F+ +V+    L+ L N+ +   VL  +      VK       +KM     +   + + LLGLTW FA  A G +R+FF +LF IFN+LQGFFIF+F+ +    VR +W+     G+  ++ +S GSS
Sbjct: 2390 ETASKYKGTYKWLLTNPTETAQTRCIKNE-DG-NATRFCSISINT-GKSQWEKPKFKQCKLLQELPDKIVDLANITISDENAED---VAEHILNLINESPALGKEETKIIVSKISDISQCDEISMNLTHVMLQIINVVLEKQNNSASDLHE---ISNEILRIIERTGHKMEFSGQIANLTVAGLALAVLRGDHTFDGMAFSI-HSYEEGTDPEIFLGN-VPVGGILASIYLPKSLTERIPLSNLQTILFNFFGQTSLFKTKNVTKALTTYVVSASISDDMFIQNLADPVVITLQHIGGNQNYGQVH-CAFWDFENNNGLGGWNSSGCK-VKETNVNYTICQCDHLTHFGVLMDLSRSTVDSVNEQILALITYTGCGISSIFLGVAVVTYIAFHKLRKDYPAKILINLCTALLMLNLVFLINSWLSSFQKVGVCITAAVALHYFLLVSFTWMGLEAVHMYLALVKVFNIYIPNY--ILKFCLVGWGIPAIMVAITVSVKKDLYGTLSPT-TPFCWIKDDSIFYISVVAYFCLIFLMNLSMFCTVLVQLNS----VKSQIQKTRRKMILHDLKGTMSLTFLLGLTWGFAFFAWGPMRNFFLYLFAIFNTLQGFFIFVFHCVMKESVREQWQIHLCCGWLRLDNSSDGSS 3016
The following BLAST results are available for this feature:
BLAST of TCONS_00058085-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGRG41.130e-6129.83Adhesion G-protein coupled receptor G4 OS=Homo sap... [more]
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