TCONS_00058128-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058128-protein
Unique NameTCONS_00058128-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length491

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058128-protein ID=TCONS_00058128-protein|Name=TCONS_00058128-protein|organism=Clytia hemisphaerica|type=polypeptide|length=491bp
MGVNEVADRNSPPALNMETLLQNKSDIKLNGSTGKYTEDVQEEEDYDFYR
FIVSDFHGIARSKLVTKSAYKYMKKRGPGIAWKTVLLSFDNYFNCEAKRL
DGERCTDARLTPAEDLSVPRSLPWAGEGYKIAGVLCETWWGIDGLRQQAC
PRYMARRLCDQLESEFGLRIFHGTEMEFTLFKEKGVPEFDDGGLYIPQEL
DTVCKELLPLSKHCEAAGIPIETLQTEFGPGQLEVVLKPAYGIEGADNSF
LFKCAAKEILAKPGFHGRATFMSKPIIDKVGSSNHFNHSLWKVKDNGELE
DSMWDGTQESKLTKTAQHWLAGILKHTPALAAIFNPTVNDWRRLHITAST
RDITTPHYITWGIENRLTLIRVIARGAGKATYLENRLPGATMNPYLALAG
MVAAGIDGIRNKIELPAPGNTENEFGVLPGTLEEALDALKSSSVMREHLG
DEFVNWFVCAKEKEIEVLNEYTDKNGGDSFQTEVDFYSKWI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036637XLOC_036637Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058128TCONS_00058128Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008146Gln_synth_cat_dom
IPR014746Gln_synth/guanido_kin_cat_dom
IPR008147Gln_synt_b-grasp
Vocabulary: Molecular Function
TermDefinition
GO:0004356glutamate-ammonia ligase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006807nitrogen compound metabolic process
GO:0006542glutamine biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006542 glutamine biosynthetic process
biological_process GO:0006807 nitrogen compound metabolic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004356 glutamate-ammonia ligase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008146Glutamine synthetase, catalytic domainSMARTSM01230Gln_synt_C_2coord: 148..405
e-value: 3.1E-66
score: 236.0
IPR008146Glutamine synthetase, catalytic domainPFAMPF00120Gln-synt_Ccoord: 149..472
e-value: 2.4E-75
score: 253.6
IPR014746Glutamine synthetase/guanido kinase, catalytic domainGENE3D3.30.590.10coord: 148..484
e-value: 2.6E-78
score: 263.0
IPR008147Glutamine synthetase, beta-Grasp domainGENE3D3.10.20.70coord: 31..147
e-value: 1.9E-7
score: 30.7
NoneNo IPR availableSUPERFAMILY55931Glutamine synthetase/guanido kinasecoord: 149..472

Blast
[Close]
BLAST of TCONS_00058128-protein vs. Swiss-Prot (Human)
Match: LGSN (Lengsin OS=Homo sapiens GN=LGSN PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.453e-47
Identity = 131/449 (29.18%), Postives = 214/449 (47.66%), Query Frame = 0 
Query:   31 GSTGKYTEDVQEEEDYDFYRFIVSDFHGIARSKLVTKSAYKYMKKRGPGIAW-KTVLLSFDNYFNCEAKRLDGERCTDARLTPAEDLSVPRSLPWAGEGYKIAGVLCETWWGIDGLRQQACPRYMARRLCDQLESEFGLRIFHGTEMEFTLFKEKGVPEFDDGGL-------YIPQELDTVCKELLPLSKHCEAAGIPIETLQTEFGPGQLEVVLKPAYGIEGADNSFLFKCAAKEILAKPGFHGRATFMSKPIIDKVGSSNHFNHSLWKVKDNGELEDSMWDGTQESKLTKTAQHWLAGILKHTPALAAIFNPTVNDWRRLHITASTRDITTPHYITWGIENRLTLIRVIARGAGKATYLENRLPGATMNPYLALAGMVAAGIDGIRNKIELPAPGNTENEF-----GVLPGTLEEALDALKSSSVMREHLGDEFVNWFVCAKEKEIE 466
             S  K+      +    F RF  +D HG++RSK +   A+ + +K   G+   +  L    N  + E   +    C ++ +    +LS  R LPWA    + A V+C+T+  + G      PRY+A+R    L++  G  +      +F +F   GVPE  +  +       ++        +EL+    H    G  +E+  +   PGQ+E+   P +GI  ADN+F  +   KE+  K  +   + F+     D    S   +HSLW V     +  S   GT++  LT T + WLAG+LKH+ AL+ +  P+V+  +R   +   +D+      TWG  +   +  +   G  K T +EN+L  AT NPYL LA  VAAG+DG+ +  E+ A  +   +F       +P  LE+AL AL+    +R+ LG+ F+ +FV  K+ E+E
Sbjct:   70 SSRMKHIRQAMAKNRLQFVRFEATDLHGVSRSKTI--PAHFFQEKVSHGVCMPRGYLEVIPNPKDNEMNNIRAT-CFNSDIVLMPELSTFRVLPWAD---RTARVICDTF-TVTGEPLLTSPRYIAKRQLSHLQAS-GFSLLSAFIYDFCIF---GVPEILNSKIISFPALTFLNNHDQPFMQELVDGLYH---TGANVESFSSSTRPGQMEISFLPEFGISSADNAFTLRTGVKEVARKYNYIA-SFFIETGFCD----SGILSHSLWDVDRKKNMFCST-SGTEQ--LTITGKKWLAGLLKHSAALSCLMAPSVSCRKRY--SKDRKDLKKSVPTTWGYNDNSCIFNIKCHGE-KGTRIENKLGSATANPYLVLAATVAAGLDGLHSSNEVLAGPDESTDFYQVEPSEIPLKLEDALVALEEDQCLRQALGETFIRYFVAMKKYELE 493
The following BLAST results are available for this feature:
BLAST of TCONS_00058128-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LGSN1.453e-4729.18Lengsin OS=Homo sapiens GN=LGSN PE=1 SV=1[more]
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