TCONS_00058142-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058142-protein
Unique NameTCONS_00058142-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1611

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058142-protein ID=TCONS_00058142-protein|Name=TCONS_00058142-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1611bp
MEDQSRAVASDYQPHEIDNKIEINNNTMTIHAIQEALFEEDETEDGIKKP
PTVQVEPRPKPSKKRANSNVVLRRKHSVPNIVIPSSFGQKINVTFRDDTK
RTSSFKHYSTGYFYNDVQIPQYGANNNHADVINKNGGKKKKKRGLRRTLS
MPSFQKQIVKEEEGRLCEGRKCSELPPQHRHIATKICHHSDCQALNNMNP
LLLCPECDEQNHQEVDFISHLRFDLPSSTTTPINLHRKTSMKSNHSDDSG
TEEDSDASYRFDKKNRSYSSARRFFNISANKNKGRLKKLQSFDQQQESPE
DCFTLQLYDQDENLLAAESVSVKKGRTLKEAIGPLLENYNVNLDTHSIFL
ESSKTPLRLDFITAPLAGNTLHVKATKKMQVDERIVKLMQNVDEQKQPSQ
RQKKTIMSIMSNDDSQAQIKTASLPASNARLTKKGGSSKDLSKSLPDLLQ
QYSMKGFEGSSSINLSDNLDGSEASLVSNDDVEEDLEEKWTDVIDGPEDM
TRSQKNQQEAIWELLSTEYKYVGKIRVILQVFRECLFSLQRDNFLREVDS
ERLFSNIQEIYNTNRIFWSEYLRHVVAETKRTREPIKPSQLLDSFARFED
LFDPYIKYCLEESHCVAYLKQLKETNENFNEYLLWCENQSECHRLKLADL
LVKPMQRVTKYALLLKAVLQRTIDTDEILSLENMISQVDRFVSKINTTLR
LRHEEQKLKTVLNRLENYCPIEATEEVDKVIQDYCNLDLHQKVPGLPEDE
QRCILLDGSMKMIEKQGRLDVQVFLFTDVLLITKAKKNGEKFRIIRPPYR
LNKVVIYPSSQFGSFILIYLNEYGVLVNAFTLQVQNTELTKWMQAIERAK
RRYQAARSGHGSTLDFIDDDLPFSNLSVPSAYTPSMSPLPMRTMNNSISD
ENGLLPPIVVKDEDLPLRSSSSSNFTSSVRGREESSDPTDASVKRSLSDP
KTSVHPRSRDKRMAKTTKARPYSMIQTSERDQVSSWVFNDKRNRSGSIPS
DISDDSRRSSGIGDSFRSINSDTGPQIHRDGKSGNYTEMQSVQKLKKRFE
TGGEYHSDSSSSLASSTQNDPTKPVSRSNSNKRSNPDFTEQQHTIHEEEE
QPNKTRVQLDDSESEAEIDEEEDEEIFRSEEGDTTRTLNGETVLLREIPI
VIESCTQTEPCEKEPYNELYNDTTFSCDKCSSRTTKEQYSSNTDLVSTID
AETSFEMDISDKIEIGVQCGEKKTLTRSVSSQCGDFVQLTGVCEEETDTD
TLRRNNKLFYTADETDGVRSHTPLTPNQTPMMDALTQSLPEYSMNNLKNE
SPRGILKSLSDANIPSLLRDGQAPQGDVRVIHNRSQSDEPRKGQSSGSSP
KHSTVEESPGMRALMVLSENLEELNQQRTSSAGSKPKMSVQQQNSASPSL
RKTAIVNSSPQLKPKTFESVDDEKQVILRSNSSITPSQSWSSSPKQMTKS
LSEQNMYSHKRNTWHESMFQHNKNSSADRTISPVLEEDPKSSMERTFSKS
TEQLNSPRKQKSFKKTLLKKFSDARLIEREQPQQHSSSDDHVTSSVSDTS
MDSKQMKKQMEKEKKEEKKRLKMEKKLEKKEKKYSKRRSGSHTSLTSSIT
SLPTNNVTVQS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036640XLOC_036640Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058142TCONS_00058142Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000219DH-domain
IPR001849PH_domain
IPR011993PH_dom-like
IPR029071Ubiquitin-rel_dom
Vocabulary: Biological Process
TermDefinition
GO:0035023regulation of Rho protein signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005089Rho guanyl-nucleotide exchange factor activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035023 regulation of Rho protein signal transduction
molecular_function GO:0005089 Rho guanyl-nucleotide exchange factor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
2004006008001000120014001600Score = Score = Score = 29.364Score = Score = SequenceCoilCoilG3DSA:1.20.900.10G3DSA:3.10.20.90mobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litecd00160cd13244SM00325PF00621PS50010SSF48065SM00233G3DSA:2.30.29.30SSF50729SSF54236
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1550..1583
NoneNo IPR availableCOILSCoilCoilcoord: 832..852
NoneNo IPR availableGENE3D1.20.900.10coord: 485..717
e-value: 3.7E-48
score: 163.2
NoneNo IPR availableGENE3D3.10.20.90coord: 316..374
e-value: 1.0E-7
score: 31.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 916..1037
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 422..443
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1051..1138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1430..1611
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1333..1359
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1374..1416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..260
NoneNo IPR availableCDDcd00160RhoGEFcoord: 507..696
e-value: 6.79652E-36
score: 135.503
NoneNo IPR availableCDDcd13244PH_PLEKHG5_G6coord: 752..846
e-value: 1.70428E-28
score: 111.549
IPR000219Dbl homology (DH) domainSMARTSM00325RhoGEF_3coord: 510..697
e-value: 4.2E-36
score: 135.9
IPR000219Dbl homology (DH) domainPFAMPF00621RhoGEFcoord: 511..696
e-value: 2.9E-35
score: 122.1
IPR000219Dbl homology (DH) domainPROSITEPS50010DH_2coord: 506..698
score: 29.364
IPR000219Dbl homology (DH) domainSUPERFAMILY48065DBL homology domain (DH-domain)coord: 496..718
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 754..853
e-value: 1.1E-5
score: 34.8
IPR011993PH domain-likeGENE3D2.30.29.30coord: 723..856
e-value: 8.5E-14
score: 51.4
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 726..851
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 317..383

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058142-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
2004006008001000120014001600Expect = 3.90e-18 / Id = 43.35Expect = 4.19e-94 / Id = 43.35SequencePKHG5
Match NameE-valueIdentityDescription
PKHG54.185e-9443.35Pleckstrin homology domain-containing family G mem... [more]
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