TCONS_00058225-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058225-protein
Unique NameTCONS_00058225-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length462

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058225-protein ID=TCONS_00058225-protein|Name=TCONS_00058225-protein|organism=Clytia hemisphaerica|type=polypeptide|length=462bp
QIEASHCNTKTNKMADEAAIFVAIALGLLFFVIPLYLLTFRKKEEDEPQA
EVKKEEVKKTEPNTSNSQKKLRNPVSKKKVQQNLNDNGINHPYLISSLKG
HTGPITSLDFSDNGKLLASSSEDRTVRLWNVKDFREKDHKYGRGNVEFDH
ASDVAFSPDSRAFVASLANEQKIRVFKIHKEKKETGSTTMSISPEFDFDK
IHKSAIISVGISSTGKYIMTADKGTQIIIWSIKGEVYDKIDTLLMYNTFA
SISPCGNLVAACGFTSEVKLWHMQFSKSGDFQQTLKAFEIKGHRAGVLSF
SFTNDSKRFATASKDGTWKVWDINVNYLKSQEAYLLSTGNFTGYEEGLNV
NIALTHDYFTVALSVGSHLKYYDSKSGEMDKEILHAHPGSICALRWYTDS
KMLVSSGGTDRMLRVWENIHGAKANLADLKEKLKRTTSASIKERIEQQIE
DYTKFLKKFNKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036690XLOC_036690Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058225TCONS_00058225Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR0110426-blade_b-propeller_TolB-like
IPR015943WD40/YVTN_repeat-like_dom
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR000488Death_domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 419..439
NoneNo IPR availableGENE3D2.80.10.50coord: 260..332
e-value: 9.1E-14
score: 50.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..79
NoneNo IPR availableCDDcd00200WD40coord: 94..417
e-value: 1.58498E-39
score: 143.63
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 117..131
score: 39.79
coord: 309..323
score: 39.0
coord: 404..418
score: 30.35
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 91..130
e-value: 3.3E-12
score: 56.5
coord: 283..322
e-value: 1.9E-7
score: 40.7
coord: 236..272
e-value: 97.0
score: 4.5
coord: 377..417
e-value: 0.01
score: 25.0
coord: 191..231
e-value: 0.6
score: 18.4
coord: 141..177
e-value: 200.0
score: 2.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 383..416
e-value: 5.9E-4
score: 20.5
coord: 95..130
e-value: 2.0E-10
score: 40.9
coord: 290..322
e-value: 1.2E-4
score: 22.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 290..324
score: 13.951
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 98..132
score: 16.891
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 384..417
score: 10.174
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 355..441
e-value: 5.7E-7
score: 28.4
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 40..259
e-value: 4.9E-30
score: 103.7
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 404..418
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 117..131
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 98..426
score: 26.894
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 91..417
IPR000488Death domainPROSITEPS50017DEATH_DOMAINcoord: 412..449
score: 8.692

Blast
[Close]
BLAST of TCONS_00058225-protein vs. Swiss-Prot (Human)
Match: TBL2 (Transducin beta-like protein 2 OS=Homo sapiens GN=TBL2 PE=1 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 1.490e-110
Identity = 167/401 (41.65%), Postives = 252/401 (62.84%), Query Frame = 0 
Query:   40 FRKKEEDEPQAEVKKEEVKKTEPNTSNSQKKLRNPVSKKKVQQNLNDNGINHPYLISSLKGHTGPITSLDFSDNGKLLASSSEDRTVRLWNVKDFREKDHKYGRGNVEFDHASDVAFSPDSRAFVASLANEQKIRVFKIHKEKKETGSTTMSISPEFDFDKIHKSAIISVGISSTGKYIMTADKGTQIIIWSIKGEVYDKIDTLLMYNTFASISPCGNLVAACGFTSEVKLWHMQFSKSGDFQQTLKAFEIKGHRAGVLSFSFTNDSKRFATASKDGTWKVWDINVNYLKSQEAYLLSTGNFTGYEEGLNVNIALTHDYFTVALSVGSHLKYYDSKSGEMDKEILHAHPGSICALRWYTDSKMLVSSGGTDRMLRVWENIHGAKANLADLKEKLKRTTSAS 440
             R  EE   +   +K      + ++ + ++K    + K+K QQ+       H  L ++LK H+G I+ +DFS NGK LA+ ++DRT+R+W+ KDF +++H+  R NVE DHA+ V FSPD RAF+  LAN   +RVFK+   K+E G  T + +PE DF K HK+ +I +GI++TGK+IMTA   T ++IWS+KG+V   I+T  M NT A++SPCG  VA+CGFT +VK+W + F K G+FQ+ ++AFE+KGH A V SF+F+NDS+R A+ SKDGTWK+WD +V Y K Q+ YLL TG F          +AL+ +   +AL+ GS +  Y+++ GE ++     H   I  L +    + L S G  DR +R++ N  G +A + +++  LKR ++ S
Sbjct:   32 LRAGEERSGRPACQKANGFPPDKSSGSKKQKQYQRIRKEKPQQH----NFTHRLLAAALKSHSGNISCMDFSSNGKYLATCADDRTIRIWSTKDFLQREHRSMRANVELDHATLVRFSPDCRAFIVWLANGDTLRVFKM--TKREDGGYTFTATPE-DFPKKHKAPVIDIGIANTGKFIMTASSDTTVLIWSLKGQVLSTINTNQMNNTHAAVSPCGRFVASCGFTPDVKVWEVCFGKKGEFQEVVRAFELKGHSAAVHSFAFSNDSRRMASVSKDGTWKLWDTDVEYKKKQDPYLLKTGRFEEAAGAAPCRLALSPNAQVLALASGSSIHLYNTRRGEKEECFERVHGECIANLSFDITGRFLASCG--DRAVRLFHNTPGHRAMVEEMQGHLKRASNES 423
The following BLAST results are available for this feature:
BLAST of TCONS_00058225-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBL21.490e-11041.65Transducin beta-like protein 2 OS=Homo sapiens GN=... [more]
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